| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4662 |
|---|
| Symbol | |
|---|
| ID | 4012664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 4952145 |
|---|
| End bp | 4953524 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637944311 |
|---|
| Product | adenylosuccinate lyase |
|---|
| Protein accession | YP_551443 |
|---|
| Protein GI | 91790491 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0015] Adenylosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.163843 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.997243 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTTT CTACCATCAA CGCCTTGTCT CCGCTGGACG GCCGCTACGC CGGCAAACTC
AGCCAGTTAC GTCCCCTGAT GTCCGAGCAA GGCTATATGC ACCGCCGGGT CCAGGTGGAA
GTGGCCTGGT TCATCGCCCT TTCGGACGCG AAGTTTGCCG AATTCAAGCC GCTCAGCCCC
GGGGCGCGCA CTTACCTGCT GGGCCTCGTC AAGAATTTCT CGGAAAACGA TGCGGTGGCC
ATCAAGGAGA TTGAAAAAAC CACCAACCAC GACGTCAAGG CCGTGGAGTA CTGGATCAAG
TCCAAATTCG AAGCGCGGCC GGAATTGCAG GCGGCCGGTG AGTTTGTGCA TTTCGCCTGC
ACCAGCGAAG ACATCAACAA CACCAGCCAT GCGCTGCAGC TCAAAAGCAG CCGCGAGCTG
GTACTGCTGC CGGCCCTGGA CAAGGTGATT GCGCAGATGC GCAAGATGGC GCACACCTAC
GCGGCGGAGC CCATGCTCAG CCGCACCCAC GGCCAGACCG CCAGTCCGAC CACGGTAGGC
AAGGAAATCG CCAACGTGGT GGTGCGCCTG CAGGCGGCGC GCGAGAAAAT CGCCGGCATC
AGGCTGATGG CCAAAATGAA CGGCGCCGTA GGCAACTACA ACGCCCATCT GTCGGCCTGG
CCCGACTTTG ACTGGGAAGC CTTCAGCCGC AACGTGATTG AAACGCCCGA GCCACTGGGC
CTGGGCCTGA CCTTCCAGCC CTACAGCATC CAGATCGAGC CGCATGACTA CATGGCCGAG
CTGTTTGACG CCGTCGCCCG CACCAACACC ATCCTGATCG ACTTTGCGCG GGACGTCTGG
GGTTATGTGA GCGTGGGCTA TTTCAAGCAG CGCCTCAAGG AGGGCGAAAT CGGCTCCTCC
ACCATGCCGC ACAAGGTGAA CCCTATCGAC TTTGAAAACG CCGAAGGCAA CCTGGGCCTG
GCCAATGCGC TGCTCAGGCA CCTGAGCGAA AAGCTGCCGG TGTCCCGCTG GCAGCGCGAC
CTGACCGACT CGACCGTGCT GCGCAACATG GGCGTGGCGC TGGGTTACGC CGTGCTGGCC
TACAACTCAC TGGGCGTGGG GCTGGGCAAG CTGGAACTCA ACCGGGAAGC GCTGCAGGAG
GACCTGGACA GCTCGTGGGA GGTGCTGGCC GAACCGATAC AGACCGTCAT GCGCCGCTAC
GGCGTGCAGG GCGCCTACGA AAAGCTCAAG GAAGTAACGC GCGGTAAAAC CGTCAAGGCT
GAAGACCTGC ATGCCCTGAT CCGGTCCCTG CAAATTCCTG ATGCAGAAAA ACAGCGCCTG
CTGGCCATGA CACCGGCCAG CTACGTCGGC CTGGCTGCCA CCCTGGCCAG ACGGGTTTAA
|
|---|
| Protein sequence | MSFSTINALS PLDGRYAGKL SQLRPLMSEQ GYMHRRVQVE VAWFIALSDA KFAEFKPLSP
GARTYLLGLV KNFSENDAVA IKEIEKTTNH DVKAVEYWIK SKFEARPELQ AAGEFVHFAC
TSEDINNTSH ALQLKSSREL VLLPALDKVI AQMRKMAHTY AAEPMLSRTH GQTASPTTVG
KEIANVVVRL QAAREKIAGI RLMAKMNGAV GNYNAHLSAW PDFDWEAFSR NVIETPEPLG
LGLTFQPYSI QIEPHDYMAE LFDAVARTNT ILIDFARDVW GYVSVGYFKQ RLKEGEIGSS
TMPHKVNPID FENAEGNLGL ANALLRHLSE KLPVSRWQRD LTDSTVLRNM GVALGYAVLA
YNSLGVGLGK LELNREALQE DLDSSWEVLA EPIQTVMRRY GVQGAYEKLK EVTRGKTVKA
EDLHALIRSL QIPDAEKQRL LAMTPASYVG LAATLARRV
|
|---|
| |