| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4653 |
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| Symbol | |
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| ID | 4012655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4937953 |
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| End bp | 4940082 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637944302 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_551434 |
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| Protein GI | 91790482 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.686575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAATTTC CTCTTCTGAA CGGTGTCAGC TGGGCCAGCC GGCGCTGGTC GCTCTGGGCC
CTGCTGCTGG CGCTGGTGGT GACGCTGCTG GCGATTCTTG TCTGGCTGTC GGGCCGCTAC
GAGTCCAGCA TGGTGCAAAG CCGGCTGGAG CACGATGCGG GAGAGACCGT CACGGACATC
CGTTCGGGGC TGACCCGCAA CATCCAGACG TTCCAGGCCT TGCAGTCCAC GGAGCGCCCG
CCCGCCGCCT GGCATGCACC CGCCGCCGAG CTGCTGCGCG AGCATCGCGA GATCATGCGG
CTGGAGTGGC GCAGCGAGAC GCTGGAGGTG CTGGGATTTG TCGAGACGCC CTACCGGTCC
TCGGTGTTTG AGCGCCTGGG TCGTCACGGC ATGGAGGCCG ATGTCAACCT GACCTGCACC
ACGGCTCGCC GCCTGAGCGG GTCGGCCTAT TCCACCAGTT ACTTCATGCC GCAAAACGAT
GGCCTGGGTC TGGAAGTCAT GGACATGTGC TTGCCGATTG TGGCGGCGGG CCGACTGATG
GGCTATGTGG TGGCCACCTA TTCCCTGCAG GACATTCTGG GCGAACTGGT GGGCAAACAG
CTGGCCCGCG GCGTCGGCCT CTCGTTCACG GAGGCCGATG GCACGCGCCT GGCGCTGCAT
GGCGTGGTGT CGCGCGGCAG CCGGGTTTAC GTCGCCCAGC AATTGCTCGA CCTGCCGGGC
AACACGCTGG TCGTCAGGAT GGAAAGCCGG CTCGGCACCC CCGCGCTGTT CCCCAATGTG
CTGACGGCGC TGGTCACAGC CATGTCGGTG GCCTTGCTGG CCGTGCTGTT CCTGCTGGCC
CGCGACATGC GGCGGCGCCT CAAGGTGGAG CACGACCTGG GCGAGGCCCT GGCCTTTCGC
AAGGCCATGG AAGACTCGGT CCTGACGGGC CTGCGGGCGC GGGACCTGCA GGGGCGCATC
ACTTACGTCA ATCCGGCGTT CTGCAAGATG GTGGGGGTGG ATGCCAAGGA CCTGCTCAAC
CAGAGCGTCC CTGCGCCCTA CTGGCCGCCC GAGCTCGCAG CCATGTACCA GCAGCGCCAG
GAAATCCGCC TGTCCGGCAG CAACCTGCCG CGTGAGGGCC ATGAGTCCGT GTTCATGCGG
CAGGACGGCA CACGGTTTCC GGTGCTCATC ATGGAGGCGC CGCTGATCAA CGCGGTCGGC
AAGCACACCG GCTGGATGAG CGCCATTCTG GATGTCAGCG AACAGCGCCG CATTGAAGAG
CTCTCGCGCG CCAGCCAGGA CCGCCTGCAG GCCACGGCGA GGCTGGCGAT GGTGGGAGAG
ATGGCATCGC TGCTCAGCCA CGAACTCAAC CAGCCGCTGG CGGCCATTTC GAGCTATGCC
ACCGGCTCGC TCAACCTGCT GCAGGGCGAA ATGGCGCCTG CCGCGACGTC TTCCCCGGGC
GGGCCGGATG CAGGCCCGAC GGCACCGCCC CTGTCCGAAG ACCTGCAACT GGCGATGCGG
CGCATTGCCG AGCAGGCCGA ACGGGCCGGC AAGGTGATCA AGAGCGTGCA CGATTTTGTC
CGGCGGCGCG ACCAGGTACG CGAAGCCGTG GAGCCGCGGG CCTTGCTGGA CGCCATCATG
CCGCTCGTCA GCCTGCAGGC CCGCAAGCTG GGCGTGCGCG TGGTGATCGA GGTGGACGCG
GCCTGCGAGC CGGTGCTGTG CGACCGCACC ATGGTCGAGC AGGTGCTGCT CAACCTGTCG
CGCAATGGCA TGCAGGCCAT GCAGGCCATG CAGGGTATAG ACGAAACGCA GGCGCCCAAC
CAGCAGGCCA GAGTGCTCAC CTTGCGTATC CGGCCGGCAG CCTCCAATGC GCACAGCCGC
TGGGTTGAAT TTGCGGTGAT TGACCGCGGT GAGGGCATTC CCCGTGAGGT GGCGGACCAG
CTTTTCACGC CCTTCTTCAC GACCAAGGAG GAAGGCATGG GCCTGGGCCT GAGCCTGTGC
CGCACGGTGA TAGAGCAGCA TGGCGGATTC CTGGGATTTG AAGCAGCGCA GCCGCGTGGC
ACGATTTTCA GTTTCACCTT GCCGGTGGCG CTGGCGCGGG ATGGCCATGC CGATGTCGAT
GCCGCTGGTA CCGCCAAGGA AATGGCCTAG
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| Protein sequence | MKFPLLNGVS WASRRWSLWA LLLALVVTLL AILVWLSGRY ESSMVQSRLE HDAGETVTDI
RSGLTRNIQT FQALQSTERP PAAWHAPAAE LLREHREIMR LEWRSETLEV LGFVETPYRS
SVFERLGRHG MEADVNLTCT TARRLSGSAY STSYFMPQND GLGLEVMDMC LPIVAAGRLM
GYVVATYSLQ DILGELVGKQ LARGVGLSFT EADGTRLALH GVVSRGSRVY VAQQLLDLPG
NTLVVRMESR LGTPALFPNV LTALVTAMSV ALLAVLFLLA RDMRRRLKVE HDLGEALAFR
KAMEDSVLTG LRARDLQGRI TYVNPAFCKM VGVDAKDLLN QSVPAPYWPP ELAAMYQQRQ
EIRLSGSNLP REGHESVFMR QDGTRFPVLI MEAPLINAVG KHTGWMSAIL DVSEQRRIEE
LSRASQDRLQ ATARLAMVGE MASLLSHELN QPLAAISSYA TGSLNLLQGE MAPAATSSPG
GPDAGPTAPP LSEDLQLAMR RIAEQAERAG KVIKSVHDFV RRRDQVREAV EPRALLDAIM
PLVSLQARKL GVRVVIEVDA ACEPVLCDRT MVEQVLLNLS RNGMQAMQAM QGIDETQAPN
QQARVLTLRI RPAASNAHSR WVEFAVIDRG EGIPREVADQ LFTPFFTTKE EGMGLGLSLC
RTVIEQHGGF LGFEAAQPRG TIFSFTLPVA LARDGHADVD AAGTAKEMA
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