| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4644 |
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| Symbol | secF |
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| ID | 4012685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4926789 |
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| End bp | 4927742 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637944293 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_551425 |
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| Protein GI | 91790473 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTTT TCAAAATCCG GCGTGACATT CCGTTCATGC GGCACGCCCT GATCTTCAAT
GTCATCAGCT TTGCAACGTT TGCGCTGGCG GTGTTTTTCC TGTTCTCACG CGGCCTGCAC
CTGTCAGTGG AGTTCACTGG CGGCACGCTG ATGGAGGTCA ATTACGCCCA GGCGGCAGAT
GTGGGGAAAA TCCGGGCGAC CGTGGCAGGG CTGGGGCTGA CCGATGTGCA AGTGCAAAAC
TTCGGAACGT CGCGTGATGT GATGATCCGT TTGCCGGCCC AGAAGGGTGT CAGCACCGCG
CAGCAAAGCG AAAAAGTGCT GGTGGCGCTG AAGGCGGCCA GCAGCGATGT GACACTGCGC
CGCACGGAGT TTGTCGGCCC GCAGGTCGGG GAGGAGCTGG CCCACGATGG CCTGAAGGCC
CTGGCCATGG TGGTGTTCGG CATCATGGTC TACCTCGCCT TCCGCTTTGA GTGGAAGTAT
GCGGTGGCGG CCATCATTGC CAACCTGCAT GACGTCGTCA TCATTCTCGG TTTTTTCGCG
TTCTTCCAGT GGGAGTTTTC CCTCGCGGTA CTGGCCGCCG TGCTGGCGGT ACTGGGCTAT
TCCGTCAATG AGTCCGTGGT GATCTTTGAC CGGATCCGCG AGAACTTTCG CCGCTACCGG
AAGATGAACA CGGTGCAGAT CATCGACAAC GCGATCACCT CGACCATCAG CCGTACCATC
ATCACCCACG GCTCAACGCA GATCATGGTG CTGTCCATGC TGCTGTTTGG CGGGCCGACC
CTGTTTTACT TCGCCCTGGC GCTGACCATC GGCATTTTGT TCGGCATTTA CTCCTCCGTG
TTCGTGGCCG CCGCCATCGC CATGTGGCTG GGCATCCGGC GTGAAGATCT GGTCAAGGGG
CCGGCAAAAA AAGAAGAAGA TCCCAACGAC CCCAACGCAG GTGCCACGGT GTAA
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| Protein sequence | MEFFKIRRDI PFMRHALIFN VISFATFALA VFFLFSRGLH LSVEFTGGTL MEVNYAQAAD
VGKIRATVAG LGLTDVQVQN FGTSRDVMIR LPAQKGVSTA QQSEKVLVAL KAASSDVTLR
RTEFVGPQVG EELAHDGLKA LAMVVFGIMV YLAFRFEWKY AVAAIIANLH DVVIILGFFA
FFQWEFSLAV LAAVLAVLGY SVNESVVIFD RIRENFRRYR KMNTVQIIDN AITSTISRTI
ITHGSTQIMV LSMLLFGGPT LFYFALALTI GILFGIYSSV FVAAAIAMWL GIRREDLVKG
PAKKEEDPND PNAGATV
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