| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4622 |
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| Symbol | |
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| ID | 4012702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4903108 |
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| End bp | 4904625 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637944271 |
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| Product | D-alanyl-D-alanine carboxypeptidase PBP3 |
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| Protein accession | YP_551403 |
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| Protein GI | 91790451 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTTCC ACTCACCCCG CGCCCGCTTG AAGGCGCACC TGGCCGCCGG CCTGCTGGCC
GGGCTGATCA GTCTGACAAG CATCCCGGCC GCCGCCCAGA CAGCGGCCCA GGCCCTGCCC
CCCGAAGTGG CGGCCCTGCT GGCGCAAGCC AGGGTGCCGC GCGACGCACT GGCCGCCGTG
GTGGTGGACG CCGCACCGGC CCTGAATGGC CAGTCCGCCC CCCTGCTGAG CTGGCGCGCC
AGCGCCGCCA TGAACCCGGC CTCGGTCATG AAGCTGGTGA CCACTTACGC CGCCCTGGAG
CTGCTGGGCC CGTCATTCAC CTGGAACACA CCGGTGTATG TCGACGGCAC CGTCGCGGAT
GGTGTGCTGC AGGGCAACCT CATCATTCAG GGCAGGGGCG ACCCCAAGCT GGTGCTGGAG
CGGCTGTGGC TGCTGCTGCG CCGGGTGCAG GGCCTGGGCA TCAAGAGCAT CACCGGCGAC
ATCCTGCTGG ACCGCAGCGC GTTTGCCCTC ACCGCGCAAA ACTCGGGCGA CTTTGACGGC
GAACCGCTGC GGCCCTACAA CGCGGCGCCC GATGCGCTGC TGATCAACTA CAAATCGGTG
GTGATGACCT TTGCGCCCCA TCCCGGCAGC GGCATCGCCA GCGTGAGCTT TGAGCCGCCC
CTGGCCAATG TGCAGATGCA GGCCAGCGTG CCGCTGTCGG CGGGCCAGGG TGCAGGCGCT
TCGCTGCTGG AGTGCGGCGA CTACCGGGGA CGGCTGAAAG CCGACTTCAG CGACCCGTTT
CGCATCACCT TCAGCGGTAG CTACCCGGCA GGCTGCGGCG AAAAGGTCTG GCCCGTGGCC
TACATCGACC CGACGAGTTA TGCGGAGCGG GCCGTGGCGG GCCTGTGGCA GGACATGGGC
GGGCGCCTGG GCGGCCGGGT CCGCGAGGGC CGCGCGCCCC TGGGCGTGAA GCCGGCCTTC
GAGGTGGTGT CGCCGACGCT GGCCGAGGTG ATTCGCGACA TCAACAAATA CAGCAACAAC
GTGATGGCGC AGCAGCTGTT CCTGACCCTG AGCCTGGTGC CGGGCCAGCC ACGCCCGGGT
GGCCTGGACG ATGCGGCCAG CAATGAGGCC TCGCGCGAGG TGGTGCGCAG CTGGTGGCGC
GAGCGCCTGG GCGAACAGGA CATGCCGGTG CTGGACAACG GCTCAGGCCT GTCGCGGCTG
GAGCGTGCCA CTCCGCAGGG GCTGGCGCGG CTGCTGCAGA CCGCCTATGT CTCGGGCGCC
ATGCCGGAGC TGATGGCCTC GCTGCCGATC AGCGGCGTGG ACGGCACGCT CCGGCGCAGC
AAATCGCGCA TGTCGCAGGG CTGGGCTCAC CTGAAATCCG GCTCCCTGCG CGACGCCAAT
GCGCTGGCCG GCTATGTGCA CACGCCAAGC GGCCGGCGCC TGGTGGTGGT GGCCATCGTC
AACCATCCGA ATGCGCCGGC AGCGCGGCCC GCCCTGGAAG CGCTGGTGAA CTGGGCGCTG
AAGGAGGGCA GCAAATGA
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| Protein sequence | MLFHSPRARL KAHLAAGLLA GLISLTSIPA AAQTAAQALP PEVAALLAQA RVPRDALAAV
VVDAAPALNG QSAPLLSWRA SAAMNPASVM KLVTTYAALE LLGPSFTWNT PVYVDGTVAD
GVLQGNLIIQ GRGDPKLVLE RLWLLLRRVQ GLGIKSITGD ILLDRSAFAL TAQNSGDFDG
EPLRPYNAAP DALLINYKSV VMTFAPHPGS GIASVSFEPP LANVQMQASV PLSAGQGAGA
SLLECGDYRG RLKADFSDPF RITFSGSYPA GCGEKVWPVA YIDPTSYAER AVAGLWQDMG
GRLGGRVREG RAPLGVKPAF EVVSPTLAEV IRDINKYSNN VMAQQLFLTL SLVPGQPRPG
GLDDAASNEA SREVVRSWWR ERLGEQDMPV LDNGSGLSRL ERATPQGLAR LLQTAYVSGA
MPELMASLPI SGVDGTLRRS KSRMSQGWAH LKSGSLRDAN ALAGYVHTPS GRRLVVVAIV
NHPNAPAARP ALEALVNWAL KEGSK
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