| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4617 |
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| Symbol | |
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| ID | 4012697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4896911 |
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| End bp | 4898668 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637944266 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_551398 |
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| Protein GI | 91790446 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACACA TCGGCAACGA TGCTGCGTCT CCAGACGGAC CAAGTGAATG GCATTCGATT
GATTGGAAGC TAGTCATGGA GTTCGTCGGG AAGGCGCAGA TGCGCATAGC GCAGGCAGAA
CAGGAGAAGG GCTTCCGACG AGTTGCAAGA CTCACACGAA GTCTCATCCG ATCCTGGCAA
GCCAAGGCAT TGGCAGTCAG GCGAGTAACG GAGAACCAAG GGAAGCGAAC GAGTGGCGTC
GATTGCGTAC TTTGGGACAC GCCAACAAAG AAATGGAATG CGATCAGTTG TCTGAACCCT
AAAGGGTATC GGGCTCGCCC CCTAAGGCGG GCCTATATCC CGAAGGCCGA CGGAAAGGAA
CGCCCCCTGG GCATGCCGAC TATGAAGGAC CGAGCGATGC AAGCACTTTA TCTGCTTGCG
CTGGAACCGG CTGTGGAATG TGCGTCCGAT CCGAACTCGT ATGGGTTCCG GAAAGGACGA
TCCACACATG ACGCGCGGTC TCAGTTGTTT GTATGCTTAT CCAAAAAGGC TTCGGCCCAA
TGGGTATTGG ATGCGGACAT CGCGGGGTTC TTTGACAACA TCAACCATGA GTGGTTGCTG
AACCACGTCC ACATGGACAA GGTGATGCTG CGCAAGTGGT TGAAATCTGG AGTCGTTGAC
GCGGGTCAGC TCCAGCGCAC GGATGACGGT ACGCCGCAGG GCGGCGTCAT CTCGCCGGCA
TTAGCGAATA TCACCCTGAA TGGTCTGGAA ACGGGGCTCA TGCAATTCCT CCGGGAAAAG
CTGGGCGTCA ATCAGGCAGG AAAGGTGAAG GTGAACTTGG TAAGGTACGC AGATGACTTC
GTGGTGACGG GTAGTTCAAA AGACTTCCTT GAGACCACTG TCCGACCTTG GATTGTTGAA
TTCTTGCGCG AGCGGGGGTT GACACTGTCC ACGGAAAAGA CGCGCATTGT GCACATTGAC
CAAGGTTTTG ACTTCCTAGG GTGGAACTTC CGTAAATACG GAGGGAAACT ACTCATCAAG
CCGAGTCAGA AGAACGTGAA AGCGTTCTAC GCCAAGGTGA AGGAGGAAAT CGCTGGGTCG
CTATCGAAGG TTCCAGTAGA AACGTTGATA AAGCGCCTGA ACCCAATCCT CAAAGGTTGG
GCTCAGTACC ACAAGGGCAC GGTTGCCAAG CAGATTTTCA GCAAAGTGGA TTCTCTGATT
TATTGGAGAC TGATGCGCTG GGGTATGCGG ACGCACCCGC GCAAGACGGC GGGCTGGGTG
TACGGACATT ACTGGAAACA GTGTGGCTCA CGCAAACAGT TCGCGGGCTT GCAGGATGAC
CCCTCCGGAG GTGATGAAAG GATACCGCTG CCGCTGTATC GCCTGTCGGA CATGAAAATT
GTCCGGCACA TCAAGGTCAA GGGGGATTAC AACCCCTTCC ACCCGGATTG GGTCGCCGAT
GGAGAGAAAC TACGAGTACG AAGGATGGGT GAAACCATTT GGAGCGCTCA GAGGGCCTCT
CTGTGGTTCG ACCAAGGTGG TAAATGCGCT CTCTGTCAGC AAGAAATCGA CATGGCTGAG
GAAAACATGG ACGACCACCA TATCGTCTAT CGGCAGCTAG GAGGGAGTGA TGCTCTTTCC
AATCGGGTGC TGTTACATCC GATCTGTCAC AGGCGTGTCC ACGCCCTAGG TTTGAAGGTT
ATCAAGCCGG TCCCCGGTAC GGGGGACTTT AATCTGGCGA AGCAGTCGAA GGTTATGCAA
CCTGTTGAAG CTGTGTAG
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| Protein sequence | MEHIGNDAAS PDGPSEWHSI DWKLVMEFVG KAQMRIAQAE QEKGFRRVAR LTRSLIRSWQ
AKALAVRRVT ENQGKRTSGV DCVLWDTPTK KWNAISCLNP KGYRARPLRR AYIPKADGKE
RPLGMPTMKD RAMQALYLLA LEPAVECASD PNSYGFRKGR STHDARSQLF VCLSKKASAQ
WVLDADIAGF FDNINHEWLL NHVHMDKVML RKWLKSGVVD AGQLQRTDDG TPQGGVISPA
LANITLNGLE TGLMQFLREK LGVNQAGKVK VNLVRYADDF VVTGSSKDFL ETTVRPWIVE
FLRERGLTLS TEKTRIVHID QGFDFLGWNF RKYGGKLLIK PSQKNVKAFY AKVKEEIAGS
LSKVPVETLI KRLNPILKGW AQYHKGTVAK QIFSKVDSLI YWRLMRWGMR THPRKTAGWV
YGHYWKQCGS RKQFAGLQDD PSGGDERIPL PLYRLSDMKI VRHIKVKGDY NPFHPDWVAD
GEKLRVRRMG ETIWSAQRAS LWFDQGGKCA LCQQEIDMAE ENMDDHHIVY RQLGGSDALS
NRVLLHPICH RRVHALGLKV IKPVPGTGDF NLAKQSKVMQ PVEAV
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