Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4617 |
Symbol | |
ID | 4012697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4896911 |
End bp | 4898668 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637944266 |
Product | RNA-directed DNA polymerase |
Protein accession | YP_551398 |
Protein GI | 91790446 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAACACA TCGGCAACGA TGCTGCGTCT CCAGACGGAC CAAGTGAATG GCATTCGATT GATTGGAAGC TAGTCATGGA GTTCGTCGGG AAGGCGCAGA TGCGCATAGC GCAGGCAGAA CAGGAGAAGG GCTTCCGACG AGTTGCAAGA CTCACACGAA GTCTCATCCG ATCCTGGCAA GCCAAGGCAT TGGCAGTCAG GCGAGTAACG GAGAACCAAG GGAAGCGAAC GAGTGGCGTC GATTGCGTAC TTTGGGACAC GCCAACAAAG AAATGGAATG CGATCAGTTG TCTGAACCCT AAAGGGTATC GGGCTCGCCC CCTAAGGCGG GCCTATATCC CGAAGGCCGA CGGAAAGGAA CGCCCCCTGG GCATGCCGAC TATGAAGGAC CGAGCGATGC AAGCACTTTA TCTGCTTGCG CTGGAACCGG CTGTGGAATG TGCGTCCGAT CCGAACTCGT ATGGGTTCCG GAAAGGACGA TCCACACATG ACGCGCGGTC TCAGTTGTTT GTATGCTTAT CCAAAAAGGC TTCGGCCCAA TGGGTATTGG ATGCGGACAT CGCGGGGTTC TTTGACAACA TCAACCATGA GTGGTTGCTG AACCACGTCC ACATGGACAA GGTGATGCTG CGCAAGTGGT TGAAATCTGG AGTCGTTGAC GCGGGTCAGC TCCAGCGCAC GGATGACGGT ACGCCGCAGG GCGGCGTCAT CTCGCCGGCA TTAGCGAATA TCACCCTGAA TGGTCTGGAA ACGGGGCTCA TGCAATTCCT CCGGGAAAAG CTGGGCGTCA ATCAGGCAGG AAAGGTGAAG GTGAACTTGG TAAGGTACGC AGATGACTTC GTGGTGACGG GTAGTTCAAA AGACTTCCTT GAGACCACTG TCCGACCTTG GATTGTTGAA TTCTTGCGCG AGCGGGGGTT GACACTGTCC ACGGAAAAGA CGCGCATTGT GCACATTGAC CAAGGTTTTG ACTTCCTAGG GTGGAACTTC CGTAAATACG GAGGGAAACT ACTCATCAAG CCGAGTCAGA AGAACGTGAA AGCGTTCTAC GCCAAGGTGA AGGAGGAAAT CGCTGGGTCG CTATCGAAGG TTCCAGTAGA AACGTTGATA AAGCGCCTGA ACCCAATCCT CAAAGGTTGG GCTCAGTACC ACAAGGGCAC GGTTGCCAAG CAGATTTTCA GCAAAGTGGA TTCTCTGATT TATTGGAGAC TGATGCGCTG GGGTATGCGG ACGCACCCGC GCAAGACGGC GGGCTGGGTG TACGGACATT ACTGGAAACA GTGTGGCTCA CGCAAACAGT TCGCGGGCTT GCAGGATGAC CCCTCCGGAG GTGATGAAAG GATACCGCTG CCGCTGTATC GCCTGTCGGA CATGAAAATT GTCCGGCACA TCAAGGTCAA GGGGGATTAC AACCCCTTCC ACCCGGATTG GGTCGCCGAT GGAGAGAAAC TACGAGTACG AAGGATGGGT GAAACCATTT GGAGCGCTCA GAGGGCCTCT CTGTGGTTCG ACCAAGGTGG TAAATGCGCT CTCTGTCAGC AAGAAATCGA CATGGCTGAG GAAAACATGG ACGACCACCA TATCGTCTAT CGGCAGCTAG GAGGGAGTGA TGCTCTTTCC AATCGGGTGC TGTTACATCC GATCTGTCAC AGGCGTGTCC ACGCCCTAGG TTTGAAGGTT ATCAAGCCGG TCCCCGGTAC GGGGGACTTT AATCTGGCGA AGCAGTCGAA GGTTATGCAA CCTGTTGAAG CTGTGTAG
|
Protein sequence | MEHIGNDAAS PDGPSEWHSI DWKLVMEFVG KAQMRIAQAE QEKGFRRVAR LTRSLIRSWQ AKALAVRRVT ENQGKRTSGV DCVLWDTPTK KWNAISCLNP KGYRARPLRR AYIPKADGKE RPLGMPTMKD RAMQALYLLA LEPAVECASD PNSYGFRKGR STHDARSQLF VCLSKKASAQ WVLDADIAGF FDNINHEWLL NHVHMDKVML RKWLKSGVVD AGQLQRTDDG TPQGGVISPA LANITLNGLE TGLMQFLREK LGVNQAGKVK VNLVRYADDF VVTGSSKDFL ETTVRPWIVE FLRERGLTLS TEKTRIVHID QGFDFLGWNF RKYGGKLLIK PSQKNVKAFY AKVKEEIAGS LSKVPVETLI KRLNPILKGW AQYHKGTVAK QIFSKVDSLI YWRLMRWGMR THPRKTAGWV YGHYWKQCGS RKQFAGLQDD PSGGDERIPL PLYRLSDMKI VRHIKVKGDY NPFHPDWVAD GEKLRVRRMG ETIWSAQRAS LWFDQGGKCA LCQQEIDMAE ENMDDHHIVY RQLGGSDALS NRVLLHPICH RRVHALGLKV IKPVPGTGDF NLAKQSKVMQ PVEAV
|
| |