| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4612 |
|---|
| Symbol | |
|---|
| ID | 4012692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 4891933 |
|---|
| End bp | 4892406 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637944261 |
|---|
| Product | PTS IIA-like nitrogen-regulatory protein PtsN |
|---|
| Protein accession | YP_551393 |
|---|
| Protein GI | 91790441 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
|---|
| TIGRFAM ID | [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGTC TTTCGCAAAT TTTGCCCCCC TCTCAAGTGC TGGTCAGTGT TGAAGCAACC
AGCAAAAAGC GTGCTTTTGA AGAAGCCGGT CTGTTGTTTG AGAACCAGCA CGGTCTGAAT
CGCGCGCTGA TCACCGACAG CCTGTTCGCG CGTGAGCGCC TGGGCTCGAC CGGTCTTGGC
CATGGCGTGG CCATTCCGCA TGGCCGCATC AAGGGCCTGA AGGCCCCGAT GGCCGCAGTT
TTCCAGCTGC AGGCCCCCAT CGGTTTCGAT GCGCCCGATG AGCAGCCCGT CGGTTTGCTG
ATTTTTCTGC TGGTGCCGGA GGCCGCCACG CAAAAACACC TTGAAATCCT CTCTGAAATT
GCCGAGCTGC TCAGTGACAG CACGCTGCGC GAGCAGCTCA AGACGAGCAC GGATGCTGCG
GCGCTACACC ACCTGATTGC ATCGTGGCAC TCTGTCCATG AAGTCAGCTC CTAG
|
|---|
| Protein sequence | MNRLSQILPP SQVLVSVEAT SKKRAFEEAG LLFENQHGLN RALITDSLFA RERLGSTGLG
HGVAIPHGRI KGLKAPMAAV FQLQAPIGFD APDEQPVGLL IFLLVPEAAT QKHLEILSEI
AELLSDSTLR EQLKTSTDAA ALHHLIASWH SVHEVSS
|
|---|
| |