Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4601 |
Symbol | |
ID | 4012720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4879178 |
End bp | 4880935 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637944250 |
Product | RNA-directed DNA polymerase |
Protein accession | YP_551382 |
Protein GI | 91790430 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACACA TCCGAAAGGA TGCTGCGTCT CCGGGCGAAT CAAGTGAATG GCACTCCATC GATTGGAAAG CCGTCATGCA ATTCGTAGGA AAGGCGCAGA TGCGCATAGC GCAGGCAGAA GCAGAAAAGG ACTTCCGACG AGTCGCAAGA CTCGGAAGGG GTTTGATTCG ATCCTGGCAA GCCAAGGCAT TGGCCGTCAG GAGAGTAACG GAAAACCAAG GGAAGCGAAC GAGTGGCGTC GATTACGTAC TTTGGGACAC GCCAACAAAG AAATGGAATG CGATAGGTTG TCTGAACCCC AAAGGGTATC GGGCTCGCCC CCTAAGGCGG GTCTATATCC CGAAGGCCGG CGGAAAGGAA CGCCCCCTGG GCATGCCGAC TATGAAGGAC AGAGCGATGC AAGCACTTTA TCTGCTTGCG CTGGAACCGG CTGTGGAATG TGCGTCTGAC CCGAACAGCT ACGGCTTTCG GAAAGGGCGA TCAACACATG ATGCGCGGAG CCAGCTGTTC GTAACACTAT CCCAAAAGGC TTCGGCCCAA TGGGTATTGG ATGCGGACAT CTCTGGGTTC TTTGACAACA TCAACCACGA GTGGCTGCTG AACCACGTCC ACATGGACAA GGTGATGCTG CGCAAGTGGT TGAAATCTGG AGTCGTTGAC GCGGGTCAGC TCCAGCGCAC GGATGACGGT ACGCCGCAGG GCGGGGTCAT CTCGCCGGCG TTAGCGAACA TCACCCTGAA TGGTTTGGAA ACGGGGCTCA CGCAATTCCT CCGGGAAAAG TTGGGCGTCA AGCAGGCAGA AAAGGTGAAG GTGAACTTGG TAAGGTACGC AGATGACTTC GTGATAACGG GTAGTTCAAA AGACTTCCTT GAGACGACCG TCCGACCTTG GATTGTTGAA TTCCTGCGCG AGCGGGGGTT GACACTGAAC CAGGAAAAGA CGCGCATTGT GCACATTGAC CAAGGTTTTG ATTTTCTGGG GTGGAACTTC CGTAAATACG GGGGCAAGCT ACTCATCAAA CCGAGCCAGA AAAACGTGAA AGCGTTCTAT GCCAAGGTAA AAAAGGAAAT CGTTGAATCG CTATCGAAGG TTCCGGTAGA AACGTTGATA AAGCGCCTGA ACCCAATCCT CAAAGGTTGG GCTCAGTACC ACAAGGGCAC GGTTGCAAAA CAGACTTTCA GCAAAATGGA TTTTCTGATT TATTGGAGAC TGATGCGCTG GGGCTTGCGA ACGCATCCGC GCAAGACGGC GGGCTGGGTG TACGGCCATT ACTGGAAACA GTGTGGTTCA CGCAAACAAT TCGCGGGATT GCAGGATGAC CCGTCCGGAA GTGATGAAAG GATACCGCTG CCGCTGTATC TCCTGTCGGA CATGAAAATT GTCCGGCACA TCAAGGTCAA GGGGGATTAC AACCCCTTCC ACCCGGACTG GGTTGCCTAC GGAGAGAAAC TGCGAGTACG AAGGATGGGT GAAATCATCT GGAGCGCTCA AAGGGCCTCT CTGTGGTTCG ACCAAGGTGG TAAATGCGCT CTCTGTCAGC AAGAAATCGA CTTGGCTGAT GAAAACATGG ACGATCACCA TATCGTCTAT AGGCAGTTTG GAGGGAGTGA TGCTCTCTCC AACCGGGTGC TGTTACATCC GGTATGTCAC AGGCGTGTCC ACGCCCTAGG TTTGAAGGTT ATCAAGCCGG TCCCCGGTAC GGGGGACTTT AATCTGGCGA AGCAGTCGAA GGTTATGCAA CCTGTTGAAG CTGTGTAG
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Protein sequence | MEHIRKDAAS PGESSEWHSI DWKAVMQFVG KAQMRIAQAE AEKDFRRVAR LGRGLIRSWQ AKALAVRRVT ENQGKRTSGV DYVLWDTPTK KWNAIGCLNP KGYRARPLRR VYIPKAGGKE RPLGMPTMKD RAMQALYLLA LEPAVECASD PNSYGFRKGR STHDARSQLF VTLSQKASAQ WVLDADISGF FDNINHEWLL NHVHMDKVML RKWLKSGVVD AGQLQRTDDG TPQGGVISPA LANITLNGLE TGLTQFLREK LGVKQAEKVK VNLVRYADDF VITGSSKDFL ETTVRPWIVE FLRERGLTLN QEKTRIVHID QGFDFLGWNF RKYGGKLLIK PSQKNVKAFY AKVKKEIVES LSKVPVETLI KRLNPILKGW AQYHKGTVAK QTFSKMDFLI YWRLMRWGLR THPRKTAGWV YGHYWKQCGS RKQFAGLQDD PSGSDERIPL PLYLLSDMKI VRHIKVKGDY NPFHPDWVAY GEKLRVRRMG EIIWSAQRAS LWFDQGGKCA LCQQEIDLAD ENMDDHHIVY RQFGGSDALS NRVLLHPVCH RRVHALGLKV IKPVPGTGDF NLAKQSKVMQ PVEAV
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