| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4601 |
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| Symbol | |
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| ID | 4012720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4879178 |
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| End bp | 4880935 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637944250 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_551382 |
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| Protein GI | 91790430 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACACA TCCGAAAGGA TGCTGCGTCT CCGGGCGAAT CAAGTGAATG GCACTCCATC
GATTGGAAAG CCGTCATGCA ATTCGTAGGA AAGGCGCAGA TGCGCATAGC GCAGGCAGAA
GCAGAAAAGG ACTTCCGACG AGTCGCAAGA CTCGGAAGGG GTTTGATTCG ATCCTGGCAA
GCCAAGGCAT TGGCCGTCAG GAGAGTAACG GAAAACCAAG GGAAGCGAAC GAGTGGCGTC
GATTACGTAC TTTGGGACAC GCCAACAAAG AAATGGAATG CGATAGGTTG TCTGAACCCC
AAAGGGTATC GGGCTCGCCC CCTAAGGCGG GTCTATATCC CGAAGGCCGG CGGAAAGGAA
CGCCCCCTGG GCATGCCGAC TATGAAGGAC AGAGCGATGC AAGCACTTTA TCTGCTTGCG
CTGGAACCGG CTGTGGAATG TGCGTCTGAC CCGAACAGCT ACGGCTTTCG GAAAGGGCGA
TCAACACATG ATGCGCGGAG CCAGCTGTTC GTAACACTAT CCCAAAAGGC TTCGGCCCAA
TGGGTATTGG ATGCGGACAT CTCTGGGTTC TTTGACAACA TCAACCACGA GTGGCTGCTG
AACCACGTCC ACATGGACAA GGTGATGCTG CGCAAGTGGT TGAAATCTGG AGTCGTTGAC
GCGGGTCAGC TCCAGCGCAC GGATGACGGT ACGCCGCAGG GCGGGGTCAT CTCGCCGGCG
TTAGCGAACA TCACCCTGAA TGGTTTGGAA ACGGGGCTCA CGCAATTCCT CCGGGAAAAG
TTGGGCGTCA AGCAGGCAGA AAAGGTGAAG GTGAACTTGG TAAGGTACGC AGATGACTTC
GTGATAACGG GTAGTTCAAA AGACTTCCTT GAGACGACCG TCCGACCTTG GATTGTTGAA
TTCCTGCGCG AGCGGGGGTT GACACTGAAC CAGGAAAAGA CGCGCATTGT GCACATTGAC
CAAGGTTTTG ATTTTCTGGG GTGGAACTTC CGTAAATACG GGGGCAAGCT ACTCATCAAA
CCGAGCCAGA AAAACGTGAA AGCGTTCTAT GCCAAGGTAA AAAAGGAAAT CGTTGAATCG
CTATCGAAGG TTCCGGTAGA AACGTTGATA AAGCGCCTGA ACCCAATCCT CAAAGGTTGG
GCTCAGTACC ACAAGGGCAC GGTTGCAAAA CAGACTTTCA GCAAAATGGA TTTTCTGATT
TATTGGAGAC TGATGCGCTG GGGCTTGCGA ACGCATCCGC GCAAGACGGC GGGCTGGGTG
TACGGCCATT ACTGGAAACA GTGTGGTTCA CGCAAACAAT TCGCGGGATT GCAGGATGAC
CCGTCCGGAA GTGATGAAAG GATACCGCTG CCGCTGTATC TCCTGTCGGA CATGAAAATT
GTCCGGCACA TCAAGGTCAA GGGGGATTAC AACCCCTTCC ACCCGGACTG GGTTGCCTAC
GGAGAGAAAC TGCGAGTACG AAGGATGGGT GAAATCATCT GGAGCGCTCA AAGGGCCTCT
CTGTGGTTCG ACCAAGGTGG TAAATGCGCT CTCTGTCAGC AAGAAATCGA CTTGGCTGAT
GAAAACATGG ACGATCACCA TATCGTCTAT AGGCAGTTTG GAGGGAGTGA TGCTCTCTCC
AACCGGGTGC TGTTACATCC GGTATGTCAC AGGCGTGTCC ACGCCCTAGG TTTGAAGGTT
ATCAAGCCGG TCCCCGGTAC GGGGGACTTT AATCTGGCGA AGCAGTCGAA GGTTATGCAA
CCTGTTGAAG CTGTGTAG
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| Protein sequence | MEHIRKDAAS PGESSEWHSI DWKAVMQFVG KAQMRIAQAE AEKDFRRVAR LGRGLIRSWQ
AKALAVRRVT ENQGKRTSGV DYVLWDTPTK KWNAIGCLNP KGYRARPLRR VYIPKAGGKE
RPLGMPTMKD RAMQALYLLA LEPAVECASD PNSYGFRKGR STHDARSQLF VTLSQKASAQ
WVLDADISGF FDNINHEWLL NHVHMDKVML RKWLKSGVVD AGQLQRTDDG TPQGGVISPA
LANITLNGLE TGLTQFLREK LGVKQAEKVK VNLVRYADDF VITGSSKDFL ETTVRPWIVE
FLRERGLTLN QEKTRIVHID QGFDFLGWNF RKYGGKLLIK PSQKNVKAFY AKVKKEIVES
LSKVPVETLI KRLNPILKGW AQYHKGTVAK QTFSKMDFLI YWRLMRWGLR THPRKTAGWV
YGHYWKQCGS RKQFAGLQDD PSGSDERIPL PLYLLSDMKI VRHIKVKGDY NPFHPDWVAY
GEKLRVRRMG EIIWSAQRAS LWFDQGGKCA LCQQEIDLAD ENMDDHHIVY RQFGGSDALS
NRVLLHPVCH RRVHALGLKV IKPVPGTGDF NLAKQSKVMQ PVEAV
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