Gene Bpro_4588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4588 
Symbol 
ID4012746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4858879 
End bp4862448 
Gene Length3570 bp 
Protein Length1189 aa 
Translation table11 
GC content65% 
IMG OID637944237 
Productribonucleoside reductase 
Protein accessionYP_551369 
Protein GI91790417 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0209] Ribonucleotide reductase, alpha subunit 
TIGRFAM ID[TIGR01443] intein C-terminal splicing region
[TIGR01445] intein N-terminal splicing region
[TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCG AGCATTTTGG CCAGCCACAC GACGTGACAG CCACGCAGCC CATCAGCCAC 
GATGTCCTGA AGGAAAAATA CCTCAAGCCC GGCGAGAACG GGGTGGAAGA CCTGTACCGC
CGCGTGGCGC GGGCGCTGGC CTCGGTCGAA CCGGAAGCCG CGCGCGCCGA ACACGAGGCG
CTGTTCCTCG AGAACCTGCA CGCCGGTGCG ATCGGCGCCG GCCGCATCAT GAGCGCGGCC
GGCACGTCCA TCCAGGCCAC CCTGATCAAC TGCTTCGTGC AACCCGTGGG CGATTGCATC
CAGGGCATGG ATGATGGCGG CTACCCTGGC ATTTACGAGG CCCTGCGCGA GGCGGCTGAA
ACCATGCGGC GCGGCGGCGG CGTGGGCTAC GACTTTTCAC GCATCCGGCC GCGCGGCGCC
GAGGTCAAGG CGACGGCCTC CATGGCGTCG GGTCCGTGCA GCTACATCAA TGTGTTCGAC
CAGTCCTGCT CGACGGTGGA GAGCGCCGGT GCGCGGCGTG GCGCGCAAAT GGGCGTGCTG
CGCATTGACC ACCCCGACGT GTTCGAGTTC ATCACCGCCA AACGCACCCC GGGGCGCTGG
AACAATTTCA ACGTGTCGGT TGGTGTATCC GACGCCTTCA TGCAGGCCCT GGGAGACGAC
CAGCCCTGGG AGCTGGTGCA TCGTGCCAAA CCCGGCGCCA GGCTCATCGC GCAAGGAGCA
TTCCAGCGAG CCGACGGCCT GTGGGTCTAT CAGACCCTGG CTGCGAGCGA ACTGTGGGAC
ACCGTGATGC GCTCGGCCTA CGATTTCGCC GAGCCCGGCA TTCTTTTCCT GGACCACATC
AATCAGGACA ACAACCTGCG TTACTGCGAG TCGATCGAGG CGACCAATCC CTGCGTCACC
GCCGATACGT GGGTGATGAC GACAGCCGGG CCGGCGCAGG TGTCGGAGCT GACGGGCCGG
TCTTTCAGCG CAGTGGTCGA TGGCAAGGCG TATGCCGTGA CGAGCGACGG CTTTTTCAGA
ACGGGCCACA AACCCGTGCT CGCTTTGCGC ACGCGAGAAG GGCCGGCTTT GCGCCTCACG
GCCGACCACC GGGTGCGTCG CGTGGCCCGC AGAACCCGTT ACACGCTGGA GGCCGAGTGG
ACCGAAGCCG GACAGCTGCA GCCCGGTGAC GAAATCCTGT TGCATGATCA TCGCGCACTG
GGTGGCTGGG AGGGCGCCGG CACGCACGCT GAGGGCTATT TGCTTGGGTT GTTGATCGGC
GATGGAACAC TCAAGAGTGA CAAAGCCGTT ATTTCGGTCT GGGCGCCCGA GCTCAAAGTG
GCAGGCGGTG GTGCCGTGGC GTATGCGCAA ACAGGTGCAG GCGGTATCGT GCAGGCCGCC
GAGGCTGCGG CCGCCACCTT GTCGCATCGG GTCGACTTCC GGGGTTTTCA GCGCTCCATC
TCGGGACGGG GTGAGGCTCG CATGGCGTCT GGTGCTGTGC GGCACCTGGC CCATGAAATG
GGCATGCGTC CAGGGCACAA GACGATCACC ACCGCGATGG AAAAAGCCTC TTCCGTGTTC
ACCGAAGGGC TTTTGCGTGG CCTGTTTGAT GCCGATGGAT CTGTGCAGGG CTCGCAGGAA
AAAGGCGTCA GTCTGAGGCT GTCGCAAAGT GATCTGAGCT TGCTGCAGAC GGCGCAGCGC
ATGTTGCTGC GCCTGGGCAT CGCCTCGACG ATTTACCCAA ACCGGCGCCT GGCACAGGCG
CGGCCTTTGC CCGACGGACG CGGCGGGTTG AGGGTTTATG AGACGGCCTC GCAGCACGAA
CTGGTCATCA GCGCGGACAA CCTGCGGATC TACGCAGAGC GCATCGGTTT TGCAGATACC
GACAAGGCTG ACCGGCTGGA CCAGGCCCTG GGCAGTTACA ACCGCAGCCT CAACCGCGAG
CGCTTCACGG TCACGGTCGA ATCGCTGACC GAGGAGGGCT CCGAGGACGT CTTCGACGTG
ACTGTGGCTG ACATCCATGC ATTTGACGCC AACGGCCTCT ACGTGCACAA CTGCGGCGAG
CAACCCTTGC CGCCCTACGG CTGCTGCGAC CTCGGGCCCA TCATCCTCAC GCGTTTTGTG
CGGAACCCCT TCGGCTTCAA TGGCGTGCCG GACTTCGATT TCGACGCTTT CGGCAAGTCG
GTGACCACGC AGGTGCGGGC GCTCGACAAC GTGCTGGACC TGACCTTCTG GCCGCTGCCG
CAACAGCAGG CCGAGTCGGC TGCCAAGCGG CGCATTGGCG TCGGTTTTAC CGGCCTGGGT
AACGCCCTGG TCATGCTCTG CCTGCGCTAC GACGCGCCCG AGGGCCGCGA GATGGCTGCA
CGCATTGCCG TGTGCATGCG TGATGCCGCC TACGCCGCGT CGGTGGCGCT GGCCAAGGAA
AAAGGCGCTT TTCTGAAGTT TGACGCCGAG GGCTACCTCG CACCCGGTAC CTTCGCCAAC
CGGCTGCCGG CCGGGTTGCA GCAGGCCATT CGCGCGCACG GCATCCGCAA CAGCCACCTG
CTGTCGATTG CGCCCACCGG GACCGTGAGC CTGGCTTTTG CCGACAACGC TTCCAACGGC
ATCGAGCCGT CGTTTTCGTG GATGTACCGG CGCAGGAAGC GCGAGTCCGA CGGCAGCACC
ACCGATTACG CCGTGGAAGA CCACGCCTGG CGGCTGTACC GGGAGCTCGG TGGCGACGTG
GACAGGTTGC CCGGCTACTT TGTCTCGGCG CTTGAGATGT CCGCGGCCAG CCATATCGCC
ATGATGGAAG CGGTGCAGCC CTTTGTGGAC ACGGCGATCT CCAAGACCGT CAACGTGCCG
GTGGACTACG CTTATGACGA CTTCAAGGGC CTGTACCAGC AGGCCTGGCG CGCACGGCTG
AAGGGCCTGG CCACCTACCG GCCCAATGCG ATCCTCGGCG CGGTGCTGGA AACCCATGCA
AGCGCCGCAG CAACGCCGCC GGCAGCGCCG ACACCTGTGG ATCCGATGCG CACGGTGATC
GAAAGCCGGC CCAAGGGCGC GCTGTCGGCG GTGGCTGAAA AGGTCGAATA CTGGACGCAG
GAGGGCCACA AGACGCTGTA CATCGTGGTG TCCTTTTTGC CGGTGCCAGC GGCCAGCGGG
GAAGGCACGG TGGAGCGCGC CATCGAGTTT TTCATGCCGG TGGGCCAGAG CGGCGAGTCG
CAGCAGTGGA TCACCTCCAG CATGCGCATG CTGTCGCTGG CCGCGCGCGG CGGCTTTCTC
GAGCGCGCAC TCAGCGACAT GCGCAAGGTG GCCTGGGACC GTGGCCCGGT GCGGCTGGGA
ACCTATGAGA AGGCCGACGG TACACGGGTA CCGCTGTGGC ACGATTCCGA GGTCGCGGCC
ATTGCCTATG CGGTGCAAAA TATCATCGCG CGGCGCGCCC GGCAGCCTGC TGCCGGCACG
ACACCCGTGG TGGAGCCCCA GGTCGACCCC GCACTTGCGC CGCCCGTGAT GGCGGGCAAG
AAGTGCAGCG AGTGCGGCGC CCATGCCGTG ATCCGCAAGG ATGGCTGCGA CTATTGCACC
CAGTGCGGCC ATCTGGGCGT TTGCGGATGA
 
Protein sequence
MKREHFGQPH DVTATQPISH DVLKEKYLKP GENGVEDLYR RVARALASVE PEAARAEHEA 
LFLENLHAGA IGAGRIMSAA GTSIQATLIN CFVQPVGDCI QGMDDGGYPG IYEALREAAE
TMRRGGGVGY DFSRIRPRGA EVKATASMAS GPCSYINVFD QSCSTVESAG ARRGAQMGVL
RIDHPDVFEF ITAKRTPGRW NNFNVSVGVS DAFMQALGDD QPWELVHRAK PGARLIAQGA
FQRADGLWVY QTLAASELWD TVMRSAYDFA EPGILFLDHI NQDNNLRYCE SIEATNPCVT
ADTWVMTTAG PAQVSELTGR SFSAVVDGKA YAVTSDGFFR TGHKPVLALR TREGPALRLT
ADHRVRRVAR RTRYTLEAEW TEAGQLQPGD EILLHDHRAL GGWEGAGTHA EGYLLGLLIG
DGTLKSDKAV ISVWAPELKV AGGGAVAYAQ TGAGGIVQAA EAAAATLSHR VDFRGFQRSI
SGRGEARMAS GAVRHLAHEM GMRPGHKTIT TAMEKASSVF TEGLLRGLFD ADGSVQGSQE
KGVSLRLSQS DLSLLQTAQR MLLRLGIAST IYPNRRLAQA RPLPDGRGGL RVYETASQHE
LVISADNLRI YAERIGFADT DKADRLDQAL GSYNRSLNRE RFTVTVESLT EEGSEDVFDV
TVADIHAFDA NGLYVHNCGE QPLPPYGCCD LGPIILTRFV RNPFGFNGVP DFDFDAFGKS
VTTQVRALDN VLDLTFWPLP QQQAESAAKR RIGVGFTGLG NALVMLCLRY DAPEGREMAA
RIAVCMRDAA YAASVALAKE KGAFLKFDAE GYLAPGTFAN RLPAGLQQAI RAHGIRNSHL
LSIAPTGTVS LAFADNASNG IEPSFSWMYR RRKRESDGST TDYAVEDHAW RLYRELGGDV
DRLPGYFVSA LEMSAASHIA MMEAVQPFVD TAISKTVNVP VDYAYDDFKG LYQQAWRARL
KGLATYRPNA ILGAVLETHA SAAATPPAAP TPVDPMRTVI ESRPKGALSA VAEKVEYWTQ
EGHKTLYIVV SFLPVPAASG EGTVERAIEF FMPVGQSGES QQWITSSMRM LSLAARGGFL
ERALSDMRKV AWDRGPVRLG TYEKADGTRV PLWHDSEVAA IAYAVQNIIA RRARQPAAGT
TPVVEPQVDP ALAPPVMAGK KCSECGAHAV IRKDGCDYCT QCGHLGVCG