Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4588 |
Symbol | |
ID | 4012746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4858879 |
End bp | 4862448 |
Gene Length | 3570 bp |
Protein Length | 1189 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637944237 |
Product | ribonucleoside reductase |
Protein accession | YP_551369 |
Protein GI | 91790417 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR01443] intein C-terminal splicing region [TIGR01445] intein N-terminal splicing region [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCG AGCATTTTGG CCAGCCACAC GACGTGACAG CCACGCAGCC CATCAGCCAC GATGTCCTGA AGGAAAAATA CCTCAAGCCC GGCGAGAACG GGGTGGAAGA CCTGTACCGC CGCGTGGCGC GGGCGCTGGC CTCGGTCGAA CCGGAAGCCG CGCGCGCCGA ACACGAGGCG CTGTTCCTCG AGAACCTGCA CGCCGGTGCG ATCGGCGCCG GCCGCATCAT GAGCGCGGCC GGCACGTCCA TCCAGGCCAC CCTGATCAAC TGCTTCGTGC AACCCGTGGG CGATTGCATC CAGGGCATGG ATGATGGCGG CTACCCTGGC ATTTACGAGG CCCTGCGCGA GGCGGCTGAA ACCATGCGGC GCGGCGGCGG CGTGGGCTAC GACTTTTCAC GCATCCGGCC GCGCGGCGCC GAGGTCAAGG CGACGGCCTC CATGGCGTCG GGTCCGTGCA GCTACATCAA TGTGTTCGAC CAGTCCTGCT CGACGGTGGA GAGCGCCGGT GCGCGGCGTG GCGCGCAAAT GGGCGTGCTG CGCATTGACC ACCCCGACGT GTTCGAGTTC ATCACCGCCA AACGCACCCC GGGGCGCTGG AACAATTTCA ACGTGTCGGT TGGTGTATCC GACGCCTTCA TGCAGGCCCT GGGAGACGAC CAGCCCTGGG AGCTGGTGCA TCGTGCCAAA CCCGGCGCCA GGCTCATCGC GCAAGGAGCA TTCCAGCGAG CCGACGGCCT GTGGGTCTAT CAGACCCTGG CTGCGAGCGA ACTGTGGGAC ACCGTGATGC GCTCGGCCTA CGATTTCGCC GAGCCCGGCA TTCTTTTCCT GGACCACATC AATCAGGACA ACAACCTGCG TTACTGCGAG TCGATCGAGG CGACCAATCC CTGCGTCACC GCCGATACGT GGGTGATGAC GACAGCCGGG CCGGCGCAGG TGTCGGAGCT GACGGGCCGG TCTTTCAGCG CAGTGGTCGA TGGCAAGGCG TATGCCGTGA CGAGCGACGG CTTTTTCAGA ACGGGCCACA AACCCGTGCT CGCTTTGCGC ACGCGAGAAG GGCCGGCTTT GCGCCTCACG GCCGACCACC GGGTGCGTCG CGTGGCCCGC AGAACCCGTT ACACGCTGGA GGCCGAGTGG ACCGAAGCCG GACAGCTGCA GCCCGGTGAC GAAATCCTGT TGCATGATCA TCGCGCACTG GGTGGCTGGG AGGGCGCCGG CACGCACGCT GAGGGCTATT TGCTTGGGTT GTTGATCGGC GATGGAACAC TCAAGAGTGA CAAAGCCGTT ATTTCGGTCT GGGCGCCCGA GCTCAAAGTG GCAGGCGGTG GTGCCGTGGC GTATGCGCAA ACAGGTGCAG GCGGTATCGT GCAGGCCGCC GAGGCTGCGG CCGCCACCTT GTCGCATCGG GTCGACTTCC GGGGTTTTCA GCGCTCCATC TCGGGACGGG GTGAGGCTCG CATGGCGTCT GGTGCTGTGC GGCACCTGGC CCATGAAATG GGCATGCGTC CAGGGCACAA GACGATCACC ACCGCGATGG AAAAAGCCTC TTCCGTGTTC ACCGAAGGGC TTTTGCGTGG CCTGTTTGAT GCCGATGGAT CTGTGCAGGG CTCGCAGGAA AAAGGCGTCA GTCTGAGGCT GTCGCAAAGT GATCTGAGCT TGCTGCAGAC GGCGCAGCGC ATGTTGCTGC GCCTGGGCAT CGCCTCGACG ATTTACCCAA ACCGGCGCCT GGCACAGGCG CGGCCTTTGC CCGACGGACG CGGCGGGTTG AGGGTTTATG AGACGGCCTC GCAGCACGAA CTGGTCATCA GCGCGGACAA CCTGCGGATC TACGCAGAGC GCATCGGTTT TGCAGATACC GACAAGGCTG ACCGGCTGGA CCAGGCCCTG GGCAGTTACA ACCGCAGCCT CAACCGCGAG CGCTTCACGG TCACGGTCGA ATCGCTGACC GAGGAGGGCT CCGAGGACGT CTTCGACGTG ACTGTGGCTG ACATCCATGC ATTTGACGCC AACGGCCTCT ACGTGCACAA CTGCGGCGAG CAACCCTTGC CGCCCTACGG CTGCTGCGAC CTCGGGCCCA TCATCCTCAC GCGTTTTGTG CGGAACCCCT TCGGCTTCAA TGGCGTGCCG GACTTCGATT TCGACGCTTT CGGCAAGTCG GTGACCACGC AGGTGCGGGC GCTCGACAAC GTGCTGGACC TGACCTTCTG GCCGCTGCCG CAACAGCAGG CCGAGTCGGC TGCCAAGCGG CGCATTGGCG TCGGTTTTAC CGGCCTGGGT AACGCCCTGG TCATGCTCTG CCTGCGCTAC GACGCGCCCG AGGGCCGCGA GATGGCTGCA CGCATTGCCG TGTGCATGCG TGATGCCGCC TACGCCGCGT CGGTGGCGCT GGCCAAGGAA AAAGGCGCTT TTCTGAAGTT TGACGCCGAG GGCTACCTCG CACCCGGTAC CTTCGCCAAC CGGCTGCCGG CCGGGTTGCA GCAGGCCATT CGCGCGCACG GCATCCGCAA CAGCCACCTG CTGTCGATTG CGCCCACCGG GACCGTGAGC CTGGCTTTTG CCGACAACGC TTCCAACGGC ATCGAGCCGT CGTTTTCGTG GATGTACCGG CGCAGGAAGC GCGAGTCCGA CGGCAGCACC ACCGATTACG CCGTGGAAGA CCACGCCTGG CGGCTGTACC GGGAGCTCGG TGGCGACGTG GACAGGTTGC CCGGCTACTT TGTCTCGGCG CTTGAGATGT CCGCGGCCAG CCATATCGCC ATGATGGAAG CGGTGCAGCC CTTTGTGGAC ACGGCGATCT CCAAGACCGT CAACGTGCCG GTGGACTACG CTTATGACGA CTTCAAGGGC CTGTACCAGC AGGCCTGGCG CGCACGGCTG AAGGGCCTGG CCACCTACCG GCCCAATGCG ATCCTCGGCG CGGTGCTGGA AACCCATGCA AGCGCCGCAG CAACGCCGCC GGCAGCGCCG ACACCTGTGG ATCCGATGCG CACGGTGATC GAAAGCCGGC CCAAGGGCGC GCTGTCGGCG GTGGCTGAAA AGGTCGAATA CTGGACGCAG GAGGGCCACA AGACGCTGTA CATCGTGGTG TCCTTTTTGC CGGTGCCAGC GGCCAGCGGG GAAGGCACGG TGGAGCGCGC CATCGAGTTT TTCATGCCGG TGGGCCAGAG CGGCGAGTCG CAGCAGTGGA TCACCTCCAG CATGCGCATG CTGTCGCTGG CCGCGCGCGG CGGCTTTCTC GAGCGCGCAC TCAGCGACAT GCGCAAGGTG GCCTGGGACC GTGGCCCGGT GCGGCTGGGA ACCTATGAGA AGGCCGACGG TACACGGGTA CCGCTGTGGC ACGATTCCGA GGTCGCGGCC ATTGCCTATG CGGTGCAAAA TATCATCGCG CGGCGCGCCC GGCAGCCTGC TGCCGGCACG ACACCCGTGG TGGAGCCCCA GGTCGACCCC GCACTTGCGC CGCCCGTGAT GGCGGGCAAG AAGTGCAGCG AGTGCGGCGC CCATGCCGTG ATCCGCAAGG ATGGCTGCGA CTATTGCACC CAGTGCGGCC ATCTGGGCGT TTGCGGATGA
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Protein sequence | MKREHFGQPH DVTATQPISH DVLKEKYLKP GENGVEDLYR RVARALASVE PEAARAEHEA LFLENLHAGA IGAGRIMSAA GTSIQATLIN CFVQPVGDCI QGMDDGGYPG IYEALREAAE TMRRGGGVGY DFSRIRPRGA EVKATASMAS GPCSYINVFD QSCSTVESAG ARRGAQMGVL RIDHPDVFEF ITAKRTPGRW NNFNVSVGVS DAFMQALGDD QPWELVHRAK PGARLIAQGA FQRADGLWVY QTLAASELWD TVMRSAYDFA EPGILFLDHI NQDNNLRYCE SIEATNPCVT ADTWVMTTAG PAQVSELTGR SFSAVVDGKA YAVTSDGFFR TGHKPVLALR TREGPALRLT ADHRVRRVAR RTRYTLEAEW TEAGQLQPGD EILLHDHRAL GGWEGAGTHA EGYLLGLLIG DGTLKSDKAV ISVWAPELKV AGGGAVAYAQ TGAGGIVQAA EAAAATLSHR VDFRGFQRSI SGRGEARMAS GAVRHLAHEM GMRPGHKTIT TAMEKASSVF TEGLLRGLFD ADGSVQGSQE KGVSLRLSQS DLSLLQTAQR MLLRLGIAST IYPNRRLAQA RPLPDGRGGL RVYETASQHE LVISADNLRI YAERIGFADT DKADRLDQAL GSYNRSLNRE RFTVTVESLT EEGSEDVFDV TVADIHAFDA NGLYVHNCGE QPLPPYGCCD LGPIILTRFV RNPFGFNGVP DFDFDAFGKS VTTQVRALDN VLDLTFWPLP QQQAESAAKR RIGVGFTGLG NALVMLCLRY DAPEGREMAA RIAVCMRDAA YAASVALAKE KGAFLKFDAE GYLAPGTFAN RLPAGLQQAI RAHGIRNSHL LSIAPTGTVS LAFADNASNG IEPSFSWMYR RRKRESDGST TDYAVEDHAW RLYRELGGDV DRLPGYFVSA LEMSAASHIA MMEAVQPFVD TAISKTVNVP VDYAYDDFKG LYQQAWRARL KGLATYRPNA ILGAVLETHA SAAATPPAAP TPVDPMRTVI ESRPKGALSA VAEKVEYWTQ EGHKTLYIVV SFLPVPAASG EGTVERAIEF FMPVGQSGES QQWITSSMRM LSLAARGGFL ERALSDMRKV AWDRGPVRLG TYEKADGTRV PLWHDSEVAA IAYAVQNIIA RRARQPAAGT TPVVEPQVDP ALAPPVMAGK KCSECGAHAV IRKDGCDYCT QCGHLGVCG
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