| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4574 |
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| Symbol | |
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| ID | 4012732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4844196 |
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| End bp | 4845383 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637944223 |
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| Product | TRAP C4-dicarboxylate transport system permease DctM subunit |
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| Protein accession | YP_551355 |
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| Protein GI | 91790403 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.202034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGATC CGTCGCTGCC GATGCTGGTG TACTCGCAGC AGGTCATGGC GGGCATGGAC
CACTTCGTGC TGCTGGCCAT TCCCTTCTTT GTGCTGGCCG GTCTGCTGAT GGAGTCCAAC
GGCATGTCGT CGCGCCTGAT TGAACTGCTG CTGCGCATGT TCGGCCGCGT GCGCGGCGGG
CTGGGCCTGA TCACCATCAC GGCCACGGCC TTCTTTTCGG GTGTCTCCGG CTCCAAGCTG
GCCGATATCG CGGCCGTCGG CGGCATCATC ATGCCCGCCG TGCGCAAGAC CAGACAGGAC
CCGAACGAAA CGGCCGGCCT GCTGGCCTGC ACGGCCGTCA TGGCCGAAAC CATTCCGCCC
TGCATCAACA TGATCATCAT GGGCTTTGTC GCCAACATCT CGATTGCCGG CCTGTTCATG
GCCGGGCTGG TGCCGGCCGC GGTGCTGGCG CTGTCGCTGG CGGCGGTGAC GGTGTATGTG
GGCACCCGCA TCAACCCCGA TGAAGCCTTC GATGTGAAGA AGCCCATGCT CCGCCTGCTG
GGTGGCGCAC TGGTGGCATT GGTGATGGTG GCGATGATCG GCAAGGGCGT GACCTCGGGT
GTGGCCACCT CCACCGAGGT GTCGGCCTTC GCCGTGATGT ATGCCCTGGT GGTGGGCGCG
CTGGCGTTTC GTGAGCTGAC AATGCGTTCG GTGGCGCAGC TCTTCGTGCG TTCAGCCTCC
ATGGCGGGCG GTATTTTGTT CATCGTCGCG GCCGCTTCCA GCGTGTCGTT TGCGCTGACC
ATCCAGCAGA TTCCGCAGTA CCTGTCCGAC TTCATGATCA CCTTTGCGCA TCACTACGGC
AGCACCATGT TCGTGCTGCT GTCGGTGCTG ATCATGATCG TGTTTGGCGC GGTGCTCGAA
GGCGCACCGG CGCTGATCAT CTTTGGCCCG CTGCTCACCC CGATTGCGGC CCAGTTGGGC
GTGCACCCGC TGCACTTCGG CACGGTGATG GTGATCGCCA TGGGCTTTGG CCTGTTCGCG
CCACCGATCG GCCTGGGGCT GTTTGCCACC TGCGCCATCA CCGGCACCGA AGTCAAAAAC
GTGGCCCGGC CCATGATGAA GTATCTTGTG GTCTTGTTTG TGACGCTGAT GGTGCTGGTT
CTGGTGCCGG CGTTTTCCCT GTGGCTGCCC ACCCGCATGG GCTTATAG
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| Protein sequence | MADPSLPMLV YSQQVMAGMD HFVLLAIPFF VLAGLLMESN GMSSRLIELL LRMFGRVRGG
LGLITITATA FFSGVSGSKL ADIAAVGGII MPAVRKTRQD PNETAGLLAC TAVMAETIPP
CINMIIMGFV ANISIAGLFM AGLVPAAVLA LSLAAVTVYV GTRINPDEAF DVKKPMLRLL
GGALVALVMV AMIGKGVTSG VATSTEVSAF AVMYALVVGA LAFRELTMRS VAQLFVRSAS
MAGGILFIVA AASSVSFALT IQQIPQYLSD FMITFAHHYG STMFVLLSVL IMIVFGAVLE
GAPALIIFGP LLTPIAAQLG VHPLHFGTVM VIAMGFGLFA PPIGLGLFAT CAITGTEVKN
VARPMMKYLV VLFVTLMVLV LVPAFSLWLP TRMGL
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