| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4573 |
|---|
| Symbol | |
|---|
| ID | 4012731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 4843131 |
|---|
| End bp | 4844183 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637944222 |
|---|
| Product | LacI family transcription regulator |
|---|
| Protein accession | YP_551354 |
|---|
| Protein GI | 91790402 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.119042 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAAGA TTCAGGATGT GGCCAGCCGT GCTGGCGTGT CAACCAGCAC GGTGTCCAAC
GTGCTCAATG GCCGGAGCAA CCGCATGGCC AAAGAGACGC TGGCGCGTGT GGAGGCGGCG
ATTGCCGAGC TCCGGTACCG GCCCAACACC ACGGCGCGCC AGCTCAAGAC CGGCCACACG
CCCATGCTGG GTTTGCTGGT GCCGTCAATC GCCAACCCCA TGTACGGCTT CATTGCCCGT
GAGATCGAAA CCCAGGCACA GGAGCGCTAC GGCTTTCGCA TCATGATGGG CAACACCTAT
CGCGACAAGG ACAAGGAAGC CCGCTTCTTC GACGACCTGA TGGCGCATGG CGTGCGCGGC
GTGATCATCA TCTCCTCGCT CGTCGACGAG CAGCACTTCG AATCCGCCGG CGAGCGCGGC
CTGGTGGTGG TCAGTTATGA CCGCCGCGCC ACGCCTGGCG TCGAGTCGGG CATTGACCAC
GTGTCGGTCG ACAACTTCGA GGCGGCCCGC ATCGCCACCG AGCACCTGAT AGCGCAGGGC
CACAGGCGGC TGGCCTTTGT GACGGCCGCC GGCATCACCA TGAGCCGGCG TGAAAAGATC
AACGGTTTCA TGGCGGCCGC GGCCAGCGCC GGCCTGGTTG CCAGCGCGCA GGTGATCGAG
GGCACGCCGC TCAATGAATA CGGCGACTCG ATGATGAGCG AGCTGGGCCG CATCGAGGCG
GCAAAGCTCG CCGGACGCGA CCCGGCGGAG CGGCCCACCG GCGTTGTGGC GGTCAACGAC
ATGATGGCGC TGGGCCTGAT GGCCGGTTTT CGCGAGGCCG GGCTGTCCGT GCCGGCCGAC
GTGTCGGTGG TGGGCATGGA CGATGTGTTT TTGTCGGCGC TGATGCATCC GGCCCTGACC
ACGGTGCGCC TGCCCGTGCC GGAGATGGCC CACACCATCG TCGAGCGCGT GATGAGCCGG
CTGGCCGCCC CCAGCCTGCC GACCGGCGAG TTCATCTTCC AGCCCAGCCT GGTGGTCAGG
GGCTCCGTGG CAGCCCGAAG CTCCGAACAG TGA
|
|---|
| Protein sequence | MSKIQDVASR AGVSTSTVSN VLNGRSNRMA KETLARVEAA IAELRYRPNT TARQLKTGHT
PMLGLLVPSI ANPMYGFIAR EIETQAQERY GFRIMMGNTY RDKDKEARFF DDLMAHGVRG
VIIISSLVDE QHFESAGERG LVVVSYDRRA TPGVESGIDH VSVDNFEAAR IATEHLIAQG
HRRLAFVTAA GITMSRREKI NGFMAAAASA GLVASAQVIE GTPLNEYGDS MMSELGRIEA
AKLAGRDPAE RPTGVVAVND MMALGLMAGF REAGLSVPAD VSVVGMDDVF LSALMHPALT
TVRLPVPEMA HTIVERVMSR LAAPSLPTGE FIFQPSLVVR GSVAARSSEQ
|
|---|
| |