Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4569 |
Symbol | |
ID | 4012766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4837183 |
End bp | 4839099 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637944218 |
Product | sigma-54 dependent trancsriptional regulator |
Protein accession | YP_551350 |
Protein GI | 91790398 |
COG category | [K] Transcription [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.375383 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGAACAA CATCAACCGC GTTGGCATTG CGTCAGGCGC GGCTGCATCT GCTGGAACAC GGTGACTGCC CGTCAGCCGG CATCGACGAC CGGCTTGCCC GTTCGTGGCG GCGTAGCCTG GCAGCCGGCC TGTCGCCCAC CGACCGCCTG GCCGACACCG AACACGCCAG CGACGGCAAT CTGCGCCGCG CACTGGCGTT CAACCACGAT CTGCTCGCAC ATTCCCTGCC GGTGATGGAA TACCTCTTCG AGCAGGTGCG GCACAGCCAG AGCATGGTCG TCCTGGCCGA CCCGCGTGGC ACGCTGATCA ACACCTTGGG CGATGCCGAT TTTCTCGACA AGGCCGAACG CGCGGCGCTG ACCTCCGGCG CCTCGTGGCA CGAGCAGCAC CGCGGTACCA ACGCCATTGG CACCGCGCTG GCCGAAGGCA GCGGCGTCGA AATTCACGGC AGCGAGCACT TTCTCGAGCG CAACGGATTT CTCACCTGCG CGGCCGCGCC CATCATGTCG GCCAGCGGCG AGCTGATGGG CATTCTCGAC CTGTCCGGCG GCCAGCGCAG CCGGCATCCG TTTGCCCTGG GGCTGGTCAG CACGGCGGCG TGCATGATCG AAAACCGCCT GGTCATTTCC AGCTGCCGGC AATACATCCG CCTGCACCTG CACGCTCACT TCGAGGGCAT AGGCAGCGTG GCCGAGGGCA TCATCGCCCT CTCGGACGAC GGCTGGATCG TTGGCGCCAA CCGCAAGGGT CTGGCCCTGC TTCATCTGGC ATGGTCTGAT CTGGGCGCCA CGCCGCTGGC CCGCGCGATC GATGTGCGCC TTGACGAATT GCTGTCCCGG CACAAGCGCC GTCCCGGCCA GCCGACGCAG GTGCAGCTGC ACGACGGCAC CACGCTCTTT GTGCAGGTGC ATGCCGAGCC GTCAGGACTG GTCGCCGCCC CGGCGTCCGG CACTGGCAAG GTCGGCGCCA CGCAGCCCGA TGCGCTGGCC CGCCTCGACA CCGGCGACCT GCGCTGGCTC AGCGCTGCCC AGAAAGCCCG GCGCGTGGCC GGTAAGCCCA TCCCGCTGCT GATCCAGGGT GAATCGGGGG TGGGCAAGGA GCTTTTCGCC CGCGCCACGC ACGACAGCGG ACCCCGCCGT GACGGCCCCT TCGTGGCCAT CAACTGCGCC GCCGTGCCGG AAAACCTGAT CGAAGCAGAA TTGTTTGGCT ATGCACCAGG AGCGTTTACT GGCGCGCGGC GTGAAGGCAG CGCGGGCCGT CTGCGTGAAG CCCACGGCGG CACGCTTTTT CTCGATGAAG TCGGCGACAT GCCGCTGAGC ATGCAGACCC GCCTGTTGCG CGTGCTGCAG GAGCGGCAGG TCACCCCGCT CGGCGGCGGC CGGCCGGTTG ATGTCGATTT CGCCCTGATC TGCGCCACCC ACCGCAATCT GCGCGAAGCG GCCGACAAGG GCAGTTTCCG CAGCGATCTC TACTACCGCA TCAACGGCCT GACTGTCCAT CTCCCGCCCC TGCGCGAACG CAGCGATTTT GGGGTGCTGA CCGAGCGCCT GCTGGCCAGC TTCAATCCCG AATGCGATAT TCGCCTCGCA CCTGATCTGT TGGCGCGATT GAGCCGGCAT GCATGGCCTG GCAACCTGCG CCAGTACGCC AGTATGCTGC GCACCGCCAG CGCCATGCTG GACCCGCATG AGGAATGTAT CGACTGGCAG CACTTGCCAG ATGACATCAA GGAAGAACTC GCCGCCTTGA CGCAACCGGT CACCTCCCCG AGCGCAGGGG GCCCATCACA AAACCTCGAC GAACTGTCCC GCGCGGCCAT CCGGCAGGCG CTGGAGAGCA GTTGCGGCAA TATCTCGCAA GCCGCCAGGC GCCTCGGGAT CAGCCGGCAA ACGCTTTACC GCAAACTCAA CGCCTGA
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Protein sequence | MRTTSTALAL RQARLHLLEH GDCPSAGIDD RLARSWRRSL AAGLSPTDRL ADTEHASDGN LRRALAFNHD LLAHSLPVME YLFEQVRHSQ SMVVLADPRG TLINTLGDAD FLDKAERAAL TSGASWHEQH RGTNAIGTAL AEGSGVEIHG SEHFLERNGF LTCAAAPIMS ASGELMGILD LSGGQRSRHP FALGLVSTAA CMIENRLVIS SCRQYIRLHL HAHFEGIGSV AEGIIALSDD GWIVGANRKG LALLHLAWSD LGATPLARAI DVRLDELLSR HKRRPGQPTQ VQLHDGTTLF VQVHAEPSGL VAAPASGTGK VGATQPDALA RLDTGDLRWL SAAQKARRVA GKPIPLLIQG ESGVGKELFA RATHDSGPRR DGPFVAINCA AVPENLIEAE LFGYAPGAFT GARREGSAGR LREAHGGTLF LDEVGDMPLS MQTRLLRVLQ ERQVTPLGGG RPVDVDFALI CATHRNLREA ADKGSFRSDL YYRINGLTVH LPPLRERSDF GVLTERLLAS FNPECDIRLA PDLLARLSRH AWPGNLRQYA SMLRTASAML DPHEECIDWQ HLPDDIKEEL AALTQPVTSP SAGGPSQNLD ELSRAAIRQA LESSCGNISQ AARRLGISRQ TLYRKLNA
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