| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4568 |
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| Symbol | |
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| ID | 4012765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4834051 |
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| End bp | 4837110 |
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| Gene Length | 3060 bp |
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| Protein Length | 1019 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637944217 |
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| Product | excinuclease ABC subunit A |
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| Protein accession | YP_551349 |
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| Protein GI | 91790397 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.168409 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAGTT TTGCGGCCCC CTTCCCTGTG AACTCTCCTG ACGATAGCAA ATACCTTGCC
AGCGTGCTCG CCGCCCAGCG CATCAGCATC CGCGGGGCGC GCACGCACAA CCTCAAGAAC
ATCGACCTCG ACATTCCGCG CAACCAGCTG GTGGTGATCA CCGGGCTGAG CGGGTCGGGC
AAGTCATCGC TGGCCTTTGA CACCCTGTAT GCCGAGGGCC AGCGCCGCTA TGTGGAAAGC
CTGTCCACCT ACGCGCGGCA GTTTTTGCAG CTGATGGACA AGCCCGATGT GGACATGATC
GAGGGCCTGT CGCCGGCGAT TTCCATCGAG CAGAAAGCCA CCTCGCACAA CCCGCGCTCC
ACGGTGGGCA CGGTGACGGA AATCCACGAC TACCTGCGCC TGCTGTTTGC GCGCGCCGGC
ACCCCCTATT GCCCCGAGCA CGACCTGCCG CTGCAGGCGC AAAGCGTCAG CGAGATGGTG
GACGCCGTGC TGGCCCTGCC CGAAGACACC CGGCTGATGA TCCTGGCGCC CGTGGCGCGT
GAACGCAAGG GCGAGTTTGT CGAGGTATTC GCCGAGATGC AGGCCCAGGG CTATGTGCGC
TTTCGCGTCG ACGGCACGGC TTATGAATTT GACGACCTGC CCAAACTCAA GAAGGCCGAG
AAGCACAACA TCGACGTGGT GATTGACCGC CTCAAGGTGC GCAGCGACAT GCAGCAGCGG
CTGGCCGAAA GCTTTGAAGC GGCGCTGCGC CTGGCCGACG GCAAGGCGAT TGCGCTGGAA
ATGGACACGG AGAAGGAGCA CCTGTTCAGC GCCAAATTCT CCTGCCCGGT TTGCAGCTAC
TCGCTCAGCG AGATGGAGCC GCGGCTTTTC TCGTTCAACT CGCCCGTGGG CGCCTGCCCG
AATTGCGACG GCCTCGGTCA CCGGGAGTTT TTCGACCCGG CCCGCGTGGT GGCCTTTCCC
TCCCTGAGCC TGGCCAGCGG CGCCGTCAAG GGCTGGGACC GGCGCAACGG CTATTACTTC
TCGATGCTGG AGAGCCTGGC CCGGCATTAC CAGTTCGACA TTGACACGGC CTTTGAAGAC
CTGCCGGTCA AGGTGCGGCA GGTGGTGCTG CATGGCTCCG GTGAGGAAGA GATCAAATTC
AGCTACGTGA TGGACTCGGG CAATTCCGCG GGCAAGAAAG TCAGCAAGAA GCATGCGTTC
GAAGGCGTGA TCACCAACTT TGAACGCCGC TACCGCGAGA CCGACTCTGC CGCCGTGCGC
GAAGAACTGG CGCGCTACCG CGGGGTGCAG CCCTGCCCCG ACTGCGAGGG CACGCGCCTG
CGCACCGAAG CCCGCCACGT CTACCTGGTC AGCGCACCGG ACGAGGGCGC CGAGGCCTCT
GCCTCTGCGC GCGGCCAGCG CAAGGCCATC TACGAAATCA GCCGGACCAC GCTGCGCGAA
AGCTTTGACT ACTTCAACCA GCTGAAGATG CAGGGCGCCA AGGCCGAGAT TGCCGCCAAG
GTGGTGCGCG AGATCGGCCT GCGCCTGAAG TTCCTCAACG ACGTGGGGCT CAATTACCTG
AGCCTGGACC GCAGCGCCGA GACCCTCTCG GGCGGCGAAT CGCAGCGCAT CCGGCTGGCC
TCGCAGATCG GCTCGGGGCT GACCGGCGTG ATGTATGTGC TCGACGAGCC CAGCATCGGC
CTGCACCAGC GCGACAACGA CCGCCTGATC GGCACGCTCA AGCACCTGCG GGACATCGGC
AACAGCGTGC TGGTGGTCGA GCATGACGAA GACATGATCC GCGCGGCCGA CCATGTGATC
GACATGGGGC CAGGCGCCGG CATTCACGGC GGGCGCGTGA TGGCGCAGGG CACGTTTGAA
GAAGTCAAGG CCAACCCGGA CTCGCTGACC GGCCAATACC TGGCGCAGAC CCTGAAGATT
GCCGTGCCCA CGCGCCGCAC CCCCTGGCTG CCCACCGTGA AGGCGGTGGA GGCTGCCGAG
AAAAAGAAGG TCTCGCGCTT TCCGCAAAGC CCCGCCGCAG AGCGCCGCGC CGCGCGCGAA
GTCGTGCATC AGGCCACGCT GGGCGACATG CAGGCCTTGC GCGTCGTCAA TGCCACGGGC
CATAACCTGA AGGGCGTGAA TGTCGAATTC CCCGTGGGCC TGCTCACCTG CGTCACCGGC
GTCTCGGGCT CGGGCAAGTC CACGCTGGTC AACGACACGC TGTACGCCGC CGTGGCGCGC
ACGCTGTACC GGGCACACGA AGAGCCTGCA ACCCACGACG CCATTGAAGG CATAGAGCAC
TTCGACAAGG TCATCAACGT CGACCAGTCA CCGATTGGCC GCACGCCGCG CAGCAACCCG
GCCACCTACA CCGGCCTGTT CACGCCCATC CGCGAGCTGA TGGCCGAAAT GAACACGGCG
CGCGAACGCG GCTACGGCGC CGGGCGCTTC AGCTTCAACG TTGCCGGCGG CCGCTGCGAA
GCCTGCCAGG GCGACGGCGT GGTGAAGGTC GAGATGCACT TCCTGCCCGA CGTCTATGTG
CCCTGCGACG TCTGCAAGGG CATGCGCTAC AACCGCGAAA CGCTGGAAGT GCAATACAAG
GGGAAAAACA TCGCGCAGAT CCTGGACCTC ACGGTCGAGG TGGCCGCCGA ATTTTTCAAA
GCCGTCCCGA CGATTGCGCG CAAGCTGCAC ACGCTGCTGG ATGTGGGCCT GTCGTACATC
AAGCTGGGCC AGGCCGCCAC GACGCTGTCG GGCGGCGAGG CACAGCGCGT CAAGCTCGCG
CTGGAGCTGA GCAAACGCGA CACCGGCCGC ACGCTGTACA TCCTGGACGA GCCGACCACC
GGTCTGCACT TTGCCGATAT TGATTTGCTG CTCAAGGTGC TGCACCAGCT GCGCGACGCG
GGCAACACGA TTGTGGTGAT CGAGCACAAC CTCGATGTCA TCAAGACCGC CGACTGGCTG
ATCGACATGG GGCCTGAGGG AGGAGCCGGG GGTGGCACCG TGGTGGGCGT GGGCACGCCT
GAAGCCATTG CGGCCAACCC GGAGAGCCAC ACCGGCCGCT ATTTGAAACG CCTGCTTTGA
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| Protein sequence | MESFAAPFPV NSPDDSKYLA SVLAAQRISI RGARTHNLKN IDLDIPRNQL VVITGLSGSG
KSSLAFDTLY AEGQRRYVES LSTYARQFLQ LMDKPDVDMI EGLSPAISIE QKATSHNPRS
TVGTVTEIHD YLRLLFARAG TPYCPEHDLP LQAQSVSEMV DAVLALPEDT RLMILAPVAR
ERKGEFVEVF AEMQAQGYVR FRVDGTAYEF DDLPKLKKAE KHNIDVVIDR LKVRSDMQQR
LAESFEAALR LADGKAIALE MDTEKEHLFS AKFSCPVCSY SLSEMEPRLF SFNSPVGACP
NCDGLGHREF FDPARVVAFP SLSLASGAVK GWDRRNGYYF SMLESLARHY QFDIDTAFED
LPVKVRQVVL HGSGEEEIKF SYVMDSGNSA GKKVSKKHAF EGVITNFERR YRETDSAAVR
EELARYRGVQ PCPDCEGTRL RTEARHVYLV SAPDEGAEAS ASARGQRKAI YEISRTTLRE
SFDYFNQLKM QGAKAEIAAK VVREIGLRLK FLNDVGLNYL SLDRSAETLS GGESQRIRLA
SQIGSGLTGV MYVLDEPSIG LHQRDNDRLI GTLKHLRDIG NSVLVVEHDE DMIRAADHVI
DMGPGAGIHG GRVMAQGTFE EVKANPDSLT GQYLAQTLKI AVPTRRTPWL PTVKAVEAAE
KKKVSRFPQS PAAERRAARE VVHQATLGDM QALRVVNATG HNLKGVNVEF PVGLLTCVTG
VSGSGKSTLV NDTLYAAVAR TLYRAHEEPA THDAIEGIEH FDKVINVDQS PIGRTPRSNP
ATYTGLFTPI RELMAEMNTA RERGYGAGRF SFNVAGGRCE ACQGDGVVKV EMHFLPDVYV
PCDVCKGMRY NRETLEVQYK GKNIAQILDL TVEVAAEFFK AVPTIARKLH TLLDVGLSYI
KLGQAATTLS GGEAQRVKLA LELSKRDTGR TLYILDEPTT GLHFADIDLL LKVLHQLRDA
GNTIVVIEHN LDVIKTADWL IDMGPEGGAG GGTVVGVGTP EAIAANPESH TGRYLKRLL
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