| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4564 |
|---|
| Symbol | |
|---|
| ID | 4012761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 4829395 |
|---|
| End bp | 4830888 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637944214 |
|---|
| Product | MltA-interacting MipA |
|---|
| Protein accession | YP_551346 |
|---|
| Protein GI | 91790394 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3713] Outer membrane protein V |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.672306 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.232767 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTCA AGGTCAGTCA GGGTCGGTCA AGGTCAGCTT GCTGCTTTGA AGCTTGGGCA
TCAAAAAATC TTCAAAAAAC AAGATCAACG ATGAAAAGCA TCTTACTTTC GCGCAGTTTT
TGGGGCACGG CTTTGGTGGC GGCTGGTTTG TTGGCCATGA TGCCCGTCCG TGCGGCCCCT
GACCTGGAGC CGCTGACGAA TATCCTGTCG ACCCCCGGCA GCGCCGGGCT CGGCCTGGTC
ACACGCGTCG AGCGCTCACC CTACCGGGAC GGCGGCACCC GCTACGACTT GTTGCCGCTT
TATCTGTACG AGGGCGAGCG GCTGTTTCTG CATGCCAACC GGGTCGGCGT GAAAATGCTC
AACGGCAGTG AGCAGCGGCT GGACCTGTTT GTGGAGCAGC GCCTGGAGGG CTTCCCGGCT
AATCGTCTGC CCGCCGGGCT GGCAGGCATG GCGAACCGCG ACTCCGGCCT GGACGGCGGC
CTGTCTTACC GCTACAGCCA ACCCTGGGGC GCGCTGCAGG CCGAGCTGCT GCATGACATC
GGCAACACCT CCAAGGGTAG CGAGTTTCGC CTGAGCTACA CCTATGACTG GCGCTCCGGG
CCCTGGATGC TGCGTCCCAG CGTGACCGTG GCGCTGCGTG ATGCCAAGCT CAACAATTAT
TACTACGGCG TGCGGGCCAG TGAGGCCACG CCTGACCGCC CAGCCTATTC GCCGGGTGCC
GGCATCAACA CCTCGATGGG CCTGTATGGT TCCTACGATG TGTCGCAGCG CTGGCGCCTG
CTGGCTGGTG TGTCCGCCAC GGTGCTGAGC GGCAAGATCA AGGACAGCCC CATTGTGCAG
AAAAGTGCGC TGCCCGCCGT CTATGTGGGC GCAGCCTATG ACTTCGGCGG CCACAAGCGT
GAGTGGGCCG AAGACGGCTC GCCCACGTAT TTCAAGCTGC TCTATGGCAA ATCAACGGAA
GACGGCTGCC ACCTGATCAA GATACTCACG GCACGCTGCC TGTCAACGGC CACCACCAAC
GCGACCACCA TTACCGGCAT TCAGGTCGGC AAGCCCTTCA TCCGGAACGT CAATGGCTGG
CCGCTTGATT TTGTCGGCTA TGTGGGCCTG ACGCAGCACA ACGAGCGCGG ACTGCAGGCC
AACGGGGCAC AACTGGACCT CTTCATGAAA GCCGTCTACT CCGGCTTTCC GTGGAGCCAC
CGGGTCAAGA CGCGGCTGGG GCTGGGCGTG GGCCTGTCCG CGGCGCAACG GGCGCCTTAT
ATCGAGGCGT CCAGCCAGGC CGCTGGCGGG AGAACGGCTT CGCGCCTGCT CAATTACCTG
GACCCGACGA TTGATGTGAG CCTGGGCGAC CTGCTGGGCT CGCGCATGCT GAAAGATACC
TATATCGGTT TCGGCGTGTC GCACCGCTCC GGCATTTTTG GCGCGTCACG CCTGCTGGGC
AGCGTCAACG GCGGCTCCAA CTACATCTAC ACCTATGTCG AGACGGCGCT TTGA
|
|---|
| Protein sequence | MNFKVSQGRS RSACCFEAWA SKNLQKTRST MKSILLSRSF WGTALVAAGL LAMMPVRAAP
DLEPLTNILS TPGSAGLGLV TRVERSPYRD GGTRYDLLPL YLYEGERLFL HANRVGVKML
NGSEQRLDLF VEQRLEGFPA NRLPAGLAGM ANRDSGLDGG LSYRYSQPWG ALQAELLHDI
GNTSKGSEFR LSYTYDWRSG PWMLRPSVTV ALRDAKLNNY YYGVRASEAT PDRPAYSPGA
GINTSMGLYG SYDVSQRWRL LAGVSATVLS GKIKDSPIVQ KSALPAVYVG AAYDFGGHKR
EWAEDGSPTY FKLLYGKSTE DGCHLIKILT ARCLSTATTN ATTITGIQVG KPFIRNVNGW
PLDFVGYVGL TQHNERGLQA NGAQLDLFMK AVYSGFPWSH RVKTRLGLGV GLSAAQRAPY
IEASSQAAGG RTASRLLNYL DPTIDVSLGD LLGSRMLKDT YIGFGVSHRS GIFGASRLLG
SVNGGSNYIY TYVETAL
|
|---|
| |