Gene Bpro_4562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4562 
Symbol 
ID4012759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4827521 
End bp4828300 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content64% 
IMG OID637944212 
Producthydroxypyruvate isomerase 
Protein accessionYP_551344 
Protein GI91790392 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3622] Hydroxypyruvate isomerase 
TIGRFAM ID[TIGR03234] hydroxypyruvate isomerase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.427343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.384122 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAGAT TTTCCGCCAA CCTCAGCATG CTCTTCACCG AGCATGCTTT CCTCGACCGC 
TTTGAGCCTG CCGCGAAAGC CGGCTTCAAG GCCGTGGAGT TTCTTTTCCC CTATGCCTTC
AGCATCGAAG ACATCAAGTC CAGGCTGGAC CGCCACGGCC TGAAGCTGGT GCTGCACAAC
CTGCCGGCCG GCAACTGGGA GGCCGGCGAG CGCGGCATCG CCTGCCACCC CGATCGCGTC
GAGGAGTTTC GCGCCGGTGT GGCGCAGGCC ATCACCTATG CCCAGGCGCT GGGCGTGCGC
CAGCTCAACT GCCTGGCGGG CAAGGCGCCC GCGGGTGTCG ACAACGCGCT GCTGCGGCAG
ACCTTTGTGG ACAACCTGCG CCATGCGGCG GCGGCGTTGA AGAAGGCAGG TCTCAAGCTG
CTGATCGAAC CGATCAATAC CTTTGACATC CCGGGCTTTT ACCTGAACCG CACGGCGCAG
GCGCTCGAAA TTCTGGACGA AGTGCGGGCC GACAACGCCT TCGTGCAGTA CGACATCTAC
CACGCGCAGC GCATGGAGGG CGAGCTGGCG GCGACCATGC AAAAGCATTT GCCGCGCATT
GGCCACATCC AGCTGGCCGA CAATCCGGGC CGCAACGAGC CGGGCACGGG CGAGATCAAT
TACGCGTTTC TGTTCGCGCA CCTGGACCGC ATCGGCTACG ACGGCTGGAT TGGCTGCGAA
TACAAGCCTG CGGGCACCAC GGAAGCCGGC CTCGGCTGGC GCGAACGCCT GGCAGCCTGA
 
Protein sequence
MPRFSANLSM LFTEHAFLDR FEPAAKAGFK AVEFLFPYAF SIEDIKSRLD RHGLKLVLHN 
LPAGNWEAGE RGIACHPDRV EEFRAGVAQA ITYAQALGVR QLNCLAGKAP AGVDNALLRQ
TFVDNLRHAA AALKKAGLKL LIEPINTFDI PGFYLNRTAQ ALEILDEVRA DNAFVQYDIY
HAQRMEGELA ATMQKHLPRI GHIQLADNPG RNEPGTGEIN YAFLFAHLDR IGYDGWIGCE
YKPAGTTEAG LGWRERLAA