Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4562 |
Symbol | |
ID | 4012759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 4827521 |
End bp | 4828300 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637944212 |
Product | hydroxypyruvate isomerase |
Protein accession | YP_551344 |
Protein GI | 91790392 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3622] Hydroxypyruvate isomerase |
TIGRFAM ID | [TIGR03234] hydroxypyruvate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.427343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.384122 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAGAT TTTCCGCCAA CCTCAGCATG CTCTTCACCG AGCATGCTTT CCTCGACCGC TTTGAGCCTG CCGCGAAAGC CGGCTTCAAG GCCGTGGAGT TTCTTTTCCC CTATGCCTTC AGCATCGAAG ACATCAAGTC CAGGCTGGAC CGCCACGGCC TGAAGCTGGT GCTGCACAAC CTGCCGGCCG GCAACTGGGA GGCCGGCGAG CGCGGCATCG CCTGCCACCC CGATCGCGTC GAGGAGTTTC GCGCCGGTGT GGCGCAGGCC ATCACCTATG CCCAGGCGCT GGGCGTGCGC CAGCTCAACT GCCTGGCGGG CAAGGCGCCC GCGGGTGTCG ACAACGCGCT GCTGCGGCAG ACCTTTGTGG ACAACCTGCG CCATGCGGCG GCGGCGTTGA AGAAGGCAGG TCTCAAGCTG CTGATCGAAC CGATCAATAC CTTTGACATC CCGGGCTTTT ACCTGAACCG CACGGCGCAG GCGCTCGAAA TTCTGGACGA AGTGCGGGCC GACAACGCCT TCGTGCAGTA CGACATCTAC CACGCGCAGC GCATGGAGGG CGAGCTGGCG GCGACCATGC AAAAGCATTT GCCGCGCATT GGCCACATCC AGCTGGCCGA CAATCCGGGC CGCAACGAGC CGGGCACGGG CGAGATCAAT TACGCGTTTC TGTTCGCGCA CCTGGACCGC ATCGGCTACG ACGGCTGGAT TGGCTGCGAA TACAAGCCTG CGGGCACCAC GGAAGCCGGC CTCGGCTGGC GCGAACGCCT GGCAGCCTGA
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Protein sequence | MPRFSANLSM LFTEHAFLDR FEPAAKAGFK AVEFLFPYAF SIEDIKSRLD RHGLKLVLHN LPAGNWEAGE RGIACHPDRV EEFRAGVAQA ITYAQALGVR QLNCLAGKAP AGVDNALLRQ TFVDNLRHAA AALKKAGLKL LIEPINTFDI PGFYLNRTAQ ALEILDEVRA DNAFVQYDIY HAQRMEGELA ATMQKHLPRI GHIQLADNPG RNEPGTGEIN YAFLFAHLDR IGYDGWIGCE YKPAGTTEAG LGWRERLAA
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