| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4559 |
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| Symbol | mnmA |
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| ID | 4012756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4823227 |
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| End bp | 4824492 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637944209 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_551341 |
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| Protein GI | 91790389 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.888392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.954276 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGACGA AATACCGCAT TGAAGTGGGA ATTGCATCAT CGCGGGATAA TCGCACACCT
ATGGACAAGC AACACAGCAA GCAACGGATC GTGGTGGGTT TAAGCGGCGG CGTCGATTCA
GCGGTGACGG CTTACCTGCT GAAACAGCAG GGCCATGAGG TCATCGGCAT CTTCATGAAA
AACTGGGAAG ATGACGACGA CAGCGAGTAC TGCTCCTCCA ATATCGACTT CGTGGACGCC
GCAGCCGTGG CCGATGTGAT CGGCATCGAG ATTGAGCACG TCAACTTCGC GGCCGACTAC
AAGGACCGGG TGTTCGCCGA GTTCCTGCGC GAGTACCAGG CCGGCCGCAC GCCCAACCCC
GACATCCTGT GCAACGCCGA GATCAAGTTC AAGGCCTTCC TGGACCATGC GATGCGCCTG
GGCGCCGAAA AGATCGCCAC GGGGCATTAC GCCAGGGTTC GCAGAAATGA AAGCACCGGA
CTGCACGAAC TGCTCAAGGG CCTGGACCCG GCCAAGGACC AGAGCTATTT TCTGCACCGC
CTGAACCAGG CCCAACTGTC CAAAACGCTG TTCCCGGTGG GCGAGCTGCA CAAGACCGAA
GTGCGGCGCA TTGCCGACGA GATTGGCCTG CCGAACGCGA AGAAAAAAGA TTCGACCGGC
ATCTGCTTCA TCGGCGAGCG GCCCTTCCGC GACTTCCTGA ACCGCTACAT CGCCAAGGCG
CCCGGCCCGA TTAAAAATGA CCGGGGCCGC GTGCTGGGCA AGCATGTGGG CCTGTCTTTT
TACACGCTGG GCCAGCGCCA GGGCCTGGGC ATAGGCGGCG TGAAGGCCCG AGGCGCAGAA
CTCAAGGCCG CCCAGGCGCG CGGGCAGCGC GGCGTCGGTG AACATGAGCC CTGGTTTGTG
GCGCGCAAGG ACCTGGACAC CAACACCTTG TGGGTGGTAC AGGGCCACGA TCATCCGTGG
CTGCAGTCCA CGGTGCTCAG CGCGCAGGAC TGCAGCTGGG TCGCGGGTAC CGCGCCGGCC
GCGGGCTTGA TGGCCGCCAA GACCCGCTAC CGGCAGGTGG ATGCCACCTG CGAGCTGCGC
AGCGCGACGA CCGCGAATTG CGAACTGGTA TTTGCCGAGC CCCAGTGGGC CGTGACGCCC
GGGCAGTCGG CCGTTCTGTA CCAGGGCGAT GTCTGCCTGG GTGGCGGGGT GATTGCGGCC
AGCAACGTGC CCAATACCCT GCCGACGGTG TCGACCCGGT CAACGCCGGA ACTATTGGTC
AAATAA
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| Protein sequence | MRTKYRIEVG IASSRDNRTP MDKQHSKQRI VVGLSGGVDS AVTAYLLKQQ GHEVIGIFMK
NWEDDDDSEY CSSNIDFVDA AAVADVIGIE IEHVNFAADY KDRVFAEFLR EYQAGRTPNP
DILCNAEIKF KAFLDHAMRL GAEKIATGHY ARVRRNESTG LHELLKGLDP AKDQSYFLHR
LNQAQLSKTL FPVGELHKTE VRRIADEIGL PNAKKKDSTG ICFIGERPFR DFLNRYIAKA
PGPIKNDRGR VLGKHVGLSF YTLGQRQGLG IGGVKARGAE LKAAQARGQR GVGEHEPWFV
ARKDLDTNTL WVVQGHDHPW LQSTVLSAQD CSWVAGTAPA AGLMAAKTRY RQVDATCELR
SATTANCELV FAEPQWAVTP GQSAVLYQGD VCLGGGVIAA SNVPNTLPTV STRSTPELLV
K
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