| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4508 |
|---|
| Symbol | |
|---|
| ID | 4012822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 4762683 |
|---|
| End bp | 4763603 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637944160 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_551292 |
|---|
| Protein GI | 91790340 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.872153 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.61755 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAG ATCTCGAACT TCTGGACATC AGGCTGCTGC GGTTGCTGGA CCAGCTGTAT
GCCACCCACA GCGTCACGCG TGCCGCCGAA GCGCTGGGGC AAAGCCAGCC CACGGTCAGC
ATCTGGCTGG CCCGGCTGCG CAAGCAGCTG AACGACCCGC TGTTTGTGCG CACGGCCGAA
GGCATGCTGC CGACGCCGCG CACCGATGCG CTGATGGGCA CAGTGCGCGA GGTGCTGGCC
GGCTTGAAGC GGCTGTCCGA GTCGGGCACC GCATTTGACC CGGCCACGGT GCAGCGGCGC
TTCTCCATCT GCATGACGGA CGCCAGCCAC ATCACCCTGT TGCCGCGGCT GCTGGCGCAT
GTGCGGGCAC TCGCACCCGG TGTGGCGCTG GAGGCGAGTC GTATTGATAC CAACCTGGCG
CACGCCCTGC AGGCGGGCGA GGCCCACCTG GCCGTGGGGT TTCTGCCCTG GCTGGACGCC
GGCTTTTACC AGCAGACCCT GTACGCGCAG GACTGGATTT GCCTGGCCAA TGCACAGCAT
CCGCGTGTCA TCGACGAAAC CCGGGCGAAC TGGAACCTCG CGGTGTATCA GGCCGAAGCG
CACATCGGCA TCAGTTCCGG CACGGGCTAC CAGCTGCTCG ACAACACCGT GGCGTCACAG
CGCATCACAC GCCAGATACG GCTGGAGCTG CCCGGTTTTC TGGGCCTGTC GGCCATTCTC
TCGACCAGCG ACCTGATCGC CACCCTGCCC CGCCACATCG GCGAAACCCT GGCCCACGCC
GCCGGACTGC GCGTGCTGCC CTGTCCGTTC GAGATTCCGG GCTTCACCGT CAAGCAATAC
TGGCATGCCC GGTACCACCA CGACGCAGCC TGCCGCTGGC TGCGCGGCGT CTGCGCCGAA
TTGTTCATGA AAAATGCCTG A
|
|---|
| Protein sequence | MSKDLELLDI RLLRLLDQLY ATHSVTRAAE ALGQSQPTVS IWLARLRKQL NDPLFVRTAE
GMLPTPRTDA LMGTVREVLA GLKRLSESGT AFDPATVQRR FSICMTDASH ITLLPRLLAH
VRALAPGVAL EASRIDTNLA HALQAGEAHL AVGFLPWLDA GFYQQTLYAQ DWICLANAQH
PRVIDETRAN WNLAVYQAEA HIGISSGTGY QLLDNTVASQ RITRQIRLEL PGFLGLSAIL
STSDLIATLP RHIGETLAHA AGLRVLPCPF EIPGFTVKQY WHARYHHDAA CRWLRGVCAE
LFMKNA
|
|---|
| |