| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4503 |
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| Symbol | |
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| ID | 4012817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4758436 |
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| End bp | 4759263 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637944155 |
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| Product | shikimate dehydrogenase |
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| Protein accession | YP_551287 |
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| Protein GI | 91790335 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.924093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGGCCA CATCTCTTTA TGCCGTCATT GGCAACCCCA TCCAGCAGAG CAAATCGCCG
CTGATCCACG GCATGTTTGC GCAAGCCACA GGGCAAGACA TTGAATACAC CGCGATCGAG
GGGCCATCGG GTGGCTTCGC GGGTGCTGTC GATGCTTTCC GCGCTGCGGG CGGCCTGGGC
CTGAACATCA CTGCGCCATT CAAGCTCGAC GCCTTTGCCT ACGCCACCGA ACGCTCCGCG
CGGGCGCAGC TCGCCGGTGC CGTCAATGCC TTGAAATTTG ACGGAGACCG CGTGCTGGCC
GAGAACTTCG ACGGTGTCGG CCTGGTGCGC GACGTGACCC ATAACCTGGG CTGCCCGCTG
AAGGGCAAAC GCGTGTTGCT GCTGGGTGCT GGTGGCGCAG CCCGAGGCGC GCTGCTGCCC
CTCCTGGAGC AGGCACCGGC AGAGCTGGTG ATCGCCAACC GCAGCGTGGA CAAGGCACTG
GAGCTGGCAA AAATTGGCGC GGCCAGAGGT AAGGTGCGGG GCTGTGCCTA CACCGACCTG
GTCGGGCAAA CCTTTGATGT GGTGTTCAAC GCCACCTCGG CCAGCCTGCG TGCCGAGCTG
CCGCCGGTAC CGGCCGGCGT ATTTTCCAAT TGCGCCCTGG CGTATGAGCT GGCGTATGGC
AAGGGCCTGA CGCCCTTCCT GCGCCTGGCG CAAAACGCTG GCGTCAAACA GCTGGCCGAC
GGTGTGGGCA TGCTGGCCGA GCAGGCCGCC GAAGCTTTTG CCTGGTGGCG TGGCGTGCGT
CCCGACACCC TTGCGGTGAT CGGGAAGCTG ACGGTTCCGC TGGTGTAA
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| Protein sequence | MGATSLYAVI GNPIQQSKSP LIHGMFAQAT GQDIEYTAIE GPSGGFAGAV DAFRAAGGLG
LNITAPFKLD AFAYATERSA RAQLAGAVNA LKFDGDRVLA ENFDGVGLVR DVTHNLGCPL
KGKRVLLLGA GGAARGALLP LLEQAPAELV IANRSVDKAL ELAKIGAARG KVRGCAYTDL
VGQTFDVVFN ATSASLRAEL PPVPAGVFSN CALAYELAYG KGLTPFLRLA QNAGVKQLAD
GVGMLAEQAA EAFAWWRGVR PDTLAVIGKL TVPLV
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