| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4501 |
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| Symbol | |
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| ID | 4012815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4756919 |
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| End bp | 4757458 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637944153 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_551285 |
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| Protein GI | 91790333 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.832526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.604438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCAAA AACTGATCGA CAGGTACTGC CAGGCCCTGT CCTGGCTGAT GGTCGCCAGC
CTGGCGTTGA TGGTGGTGCT GGTGTTCACC AACGTGGTGT TGCGCTACGC AGCCAACTCC
GGCATTGCGG TGTCGGAGGA ACTGTCGCGC TGGTTGTTCG TCTGGCTGAC CTTTCTGGGC
GGCATCGTTG CCCTGAATGA GGGGACCCAT CTGGGCACCG ACACCGTGGT TGCCCGACTG
TCGGTGCGGG GCAAGAAGGT CTGCCTGGCG CTGGGCCATC TGCTCATGCT GTTCATCTGC
TGGCTGCTCT TCAAGGGCAC GCTGGCCCAG GTCAGGATCA ACTGGGACTC CACCAGCGCC
GCGATGGAAA CGTCGATGGC CATCTTCTAC GGCTGCGGCC TGGTGTTCGC CGTCTCCGGC
GCCGTGATTC TGCTCAATGA CTTCTGGCGC CTGATCACGG GGCAACTTTC GGACGATGAG
CTGGTCGGCG TTCAGGAGTC CGAGGATCTC CCGCACCAGG CGCACAAACC TCCCCGTTAA
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| Protein sequence | MVQKLIDRYC QALSWLMVAS LALMVVLVFT NVVLRYAANS GIAVSEELSR WLFVWLTFLG
GIVALNEGTH LGTDTVVARL SVRGKKVCLA LGHLLMLFIC WLLFKGTLAQ VRINWDSTSA
AMETSMAIFY GCGLVFAVSG AVILLNDFWR LITGQLSDDE LVGVQESEDL PHQAHKPPR
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