Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4486 |
Symbol | |
ID | 4012839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4741011 |
End bp | 4741817 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637944138 |
Product | ABC transporter related |
Protein accession | YP_551270 |
Protein GI | 91790318 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.152694 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACAGAA TGGACAATCC AACCGCGAAT GTGGTGACTG ACGCGCCGGC AACCCACACC CAGCCGCCCA GCCGTCTGGT GGCCCAGGGG CTGCAGAAAT CCTATGGCAG CCGCAAGGTG GTCCAGGACG TCTCGCTGTC CGTGCAAAAA GGCGAGGTGG TGGGCCTGCT GGGCCCCAAC GGCGCGGGCA AAACCACGTC GTTCTACATG ATCGTGGGCC TGGTGCGTGC CGATGCGGGC GAAATCTCCA TCGACGGCCA GTCGGTGGAG CACATGCCGA TCCACCTGCG CGCCCGCCTC GGCCTGAGCT ACCTGCCGCA GGAAGCATCG ATTTTCCGCA AGCTCACCGT GGAAGAAAAT GTGCGCGCCG TGCTGGAACT GCAGCGGGAC GCCACCGGCA AGCCGCTGCG CCGCGCAGAC CTTGAAGCGC GTCTCGATGC GCTGCTGCAG GACCTGCGGG TCGATCATTT GCGCGACTCG CCGGCGCCGG CGCTGTCAGG GGGCGAGCGC CGCCGCGTCG AGATCGCGCG AGCCCTGGCG ACCCAGCCGC GCTTCATCCT GCTCGACGAG CCCTTTGCCG GCATCGACCC GATCGCCGTG ATCGAAATCC AGCGCATCAT CGGTTTCCTG AAGTCGCGCG GCATTGGCGT GCTGATCACC GACCACAATG TGCGCGAAAC GCTGGGCATT TGCGACCATG CCTACATCAT CAGTGACGGC CATGTGCTGG CTGCCGGCGC CCCCTCCGAG ATTGTGAACA ACGCCGATGT GCGCCGCGTT TATCTCGGTG AACATTTCAG GATGTAA
|
Protein sequence | MDRMDNPTAN VVTDAPATHT QPPSRLVAQG LQKSYGSRKV VQDVSLSVQK GEVVGLLGPN GAGKTTSFYM IVGLVRADAG EISIDGQSVE HMPIHLRARL GLSYLPQEAS IFRKLTVEEN VRAVLELQRD ATGKPLRRAD LEARLDALLQ DLRVDHLRDS PAPALSGGER RRVEIARALA TQPRFILLDE PFAGIDPIAV IEIQRIIGFL KSRGIGVLIT DHNVRETLGI CDHAYIISDG HVLAAGAPSE IVNNADVRRV YLGEHFRM
|
| |