| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4473 |
|---|
| Symbol | |
|---|
| ID | 4012865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 4729654 |
|---|
| End bp | 4730280 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637944125 |
|---|
| Product | putative signal peptide protein |
|---|
| Protein accession | YP_551257 |
|---|
| Protein GI | 91790305 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4222] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.193689 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGTGT TGAAACAAAT GAATGCGTTG ACCATTGCGG CCGCCTGTGC ACTGTGCCTG
GCCTCGGGCG GCAGCCGTGC CGAGCTTGCG CCCGCGCCAG CAGTGGAGGC CGTCCTGGCG
GGCCATGCCA CCCTCCCCGC CACCGGCGCG GTGAAAGCGC CGGGCGATGC CGGTGCTTTT
TTTGCGACGG CCGGCAAATT TGCCAATGCC AGGCGCCAGC GCAACGAGCA ACTGGGCTCT
GAGGCGGCCA ACACTTTTGT GGGGGATGCC AAATACCCGC GCGCCTCGGG CGGCACGCTG
CCGATGAAAG GCCAGTCGGT GCAGGGCTTT TCCGGCATTG TGTCGGTGGG GAAGGGCGAA
TTTCTGGTGC TGACCGACAA CGGTTTTGGC AACAAGGTCA ATTCGCAGGA TGCGCTGCTG
ATGGTGCACC AGATGTCGGT GAACTGGGGC AAGGGTCAAG TGGTGCGCCG CGGCACCATC
TTTTTGAGCG ACCCCCATAA ACGCGTGCCT TTTCACATCC AGAATGAAAA CACGCAGCGC
CGCTACCTCA CCGGTATCGA TTTCGATCCC GAGTCGATCC AGGTGGTGGG CAATGAATGG
TGGATTGGCG ACGAGTTCGG CCCTTAG
|
|---|
| Protein sequence | MSVLKQMNAL TIAAACALCL ASGGSRAELA PAPAVEAVLA GHATLPATGA VKAPGDAGAF
FATAGKFANA RRQRNEQLGS EAANTFVGDA KYPRASGGTL PMKGQSVQGF SGIVSVGKGE
FLVLTDNGFG NKVNSQDALL MVHQMSVNWG KGQVVRRGTI FLSDPHKRVP FHIQNENTQR
RYLTGIDFDP ESIQVVGNEW WIGDEFGP
|
|---|
| |