| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4471 |
|---|
| Symbol | |
|---|
| ID | 4012863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 4727588 |
|---|
| End bp | 4728586 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637944124 |
|---|
| Product | thiamine-monophosphate kinase |
|---|
| Protein accession | YP_551256 |
|---|
| Protein GI | 91790304 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0611] Thiamine monophosphate kinase |
|---|
| TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.118432 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGGCC CCATGGGTGA GTTTGATCTG ATTGCACGCT ACTTCACACG ACCTGCACGC
CGCGCCGTGC TTGGCGTGGG CGACGACTGC GCGCTGCTGC AGCCTGCACC GGGCACGCAA
CTGGCCATTT CCTGCGACAT GCTGGTCGAA GGCCGGCACT TTTTCCCGGA TGTCGATCCT
TTCAGGCTGG GCCACAAGGC GCTGGCGGTC AACCTGAGCG ACCTGGCCGC CTGCGGCGCG
ACGCCGCTGG CCTTCACGCT GGCGCTCGCG CTGCCGCGCG CCGACGACGC CTGGCTGGAG
CCCTTTTCGC GCGGCCTGCT GCGCCTGGCC GATGCGCACG GCTGCGAGCT GGTCGGCGGC
GACACCACAC AAGGGCCACT CAATATCTGC ATCACGGTGT TCGGCGAAGT GCCTGTGGTG
GGCGGCAAGG GCCAGGCCCT GCTGCGCTCG GGCGCCAGGG CCGGGGACGA CCTGTATGTG
AGCGGCACGC TGGGCGATGC GCGGCTGGCC CTCGAAGCCC TGCGCGGCGC CCTGCCGCTG
CCCGCCGAGG CACTGGCGCA GGCCCGCACC CGCCTGGAGC AGCCGACGCC CAGGGTAGCG
CTGGGTCAGG CCTTGCGCGG CATCGCCAGC GCCGCCATCG ATGTGAGCGA CGGCCTGCTG
GGCGACCTGC GCCACATCCT GGCGGCATCG CGGGTCGGCG CCACCATCCA GACCGAACTC
GCTACCAGTT TGATAGCCTC TGGCTCCCGT TCGGCAGGGG AAAGCGCCCA CATTTCCGCG
GATAAGCAGC TGGAACTCAT ACTCTCGGGC GGAGACGATT ACGAGCTGGC CTTCACAGCG
CCCGCGTCCG CCCGTGACGC AGTGGAGGCG GCTTCACAGC AGGCGCAAAC GCCCGTCACA
CGCATCGGCA GCATCGAGAC CGACCCCGGC CTGCGGCTGC TCAATGCCCA GGGGCAACTC
ATGCCCGGCA GGTTCGCTTC ATTTGATCAC TTTGCCTGA
|
|---|
| Protein sequence | MLGPMGEFDL IARYFTRPAR RAVLGVGDDC ALLQPAPGTQ LAISCDMLVE GRHFFPDVDP
FRLGHKALAV NLSDLAACGA TPLAFTLALA LPRADDAWLE PFSRGLLRLA DAHGCELVGG
DTTQGPLNIC ITVFGEVPVV GGKGQALLRS GARAGDDLYV SGTLGDARLA LEALRGALPL
PAEALAQART RLEQPTPRVA LGQALRGIAS AAIDVSDGLL GDLRHILAAS RVGATIQTEL
ATSLIASGSR SAGESAHISA DKQLELILSG GDDYELAFTA PASARDAVEA ASQQAQTPVT
RIGSIETDPG LRLLNAQGQL MPGRFASFDH FA
|
|---|
| |