| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4468 |
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| Symbol | |
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| ID | 4012860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4722986 |
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| End bp | 4724959 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637944121 |
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| Product | putative site-specific recombinase transmembrane protein |
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| Protein accession | YP_551253 |
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| Protein GI | 91790301 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4389] Site-specific recombinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.410033 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACC TGCCCACCCT GCTCGGTGCG CTGGACCCTG AGGCCGACCT GACCGGGCGC
CACGTGTGGC TGATCAGCCT GTTCGCGTGG ATCCGCGGTG ACCAGACGTC CGTCGCGGCC
GCGGTGGCGC GGGTTCAGGC CTTTCTGGAG GCGGTCGAGG CCCAGCCGGA ATTTCAGCGG
CGCCTGCAGG CCTGGTGGCA ACAACTGATA CAGACCCTGG ACATCACCAC CTTGCTGGCG
GACTTTGGCT TTGCGCCCCG CACGGCTTTT GTCAGCGAAC TCGGCGAGCG CCTGCGCCGC
AAGATGCTGC CAGGCACGCC GGAAACCTCC GACGCGTCGG AGTTGTTCCC GCTGGTGGCA
TCGCGGCGTT TTGATGCCCA GTGGATGGCT GCCCTGGAAG AGCCGCAAAT CGAGCGGCTG
GCCCGCCTGC TCTCGGCCAA CCCTCAACTG GACACACTGC ACTGGCAGTA CAGCCTGGTG
GACGCCCTGA CCTACTGCAC GGCGCAGATC CGTGCCACCG GTTTCGCGCC GGAATTGCGG
CTGCGCATGG ACCGGGCTAC GCCCCACGCG CGGGCTTTTC ATGCCTTGCC TTCCGACGTC
GAGGAACTGC GCAGCATTTT TTTCAGACCC GAACGCGACG AGGCGCAACT TCAGGCCGCG
CTCACGCAGT ACCGCGGACG GCTCGACGCC TGCCGCCAGG CGGTCAACAG CGTCTATGCG
CACATCGAGG AGAACGGCAT CTCGGTCGGC ATGGTGTTCC GGCTGCGCCA GCTGCGCGAG
CGCATGATGC GCGTGCGGGA ACTGCTGGAC GCCCTGCTCT CGCCCAAGCC GGCCATGGCC
GCGCTCAAGC TGCTGGTGCG GCGGGTGATC ATCGGACACG ACAGTAAAAG CATAGGCGCG
CTGATCAGCG CCAATTCCAC CTTGCTGTCC GCCAAGATGG CCGAGCGCAG CGCCGAGACC
GGCGAGCGCT ACATCACGCG CAACCGCGAG GAATACCGCG AGATGCTGGG CAAGGCGATG
GGCGGCGGTG CGGTCACGGC CTTCACCACG CTGCTCAAAT TCATGGTGGT GGGCATCGGA
CTGTCGGCTT TCTGGAGCGG CTTCTGGGCC AGCGTGGCCT ACGCCGGCAC CTTCGTCATG
ATCCAGCTGC TGCATTTCAC GCTGGCCACC AAGCAACCGG CGATGACAGC GCCCGCCATG
GCCGCCAAGC TCAAGGACAT CGGATCGGCC GAGGCCACGA ATGCCGTGGA GGATTTTGTC
GATGAGGTGA CGCACCTGGT GCGCTCGCAG GTAGCGGCCG TGTTCGGCAA TGTGTTCATG
GTCGTGCCGG CCGTGCTGCT GATCAACGCG CTGATCCTGC TGCTGCTGGG CCATCCGATG
ATCAGCCACG ATGAGGCCCG CCATATCCTG GCCACGCTGA CCCTGCTGGG CCCGACGCTG
CTCTGGGCGG CCTTCACCGG TGTGCTGCTG TTTTCCGCCA GCATGATCGC CGGCTGGGCC
GAGAACTGGT TTGTACTGCA CCGCCTCGAC TCGGCGATGC GCCACAATCC GCGCTTCACC
AGCGCGCTGG GCACCGAACG GGCCGCCCGC TGGTCTGCCT TTATGCGCGA GAACATCTCC
GGCTTTGCCT CCAACATCGC GCTGGGCTTC ATGCTGGGAC TGATCCCGGC GTTCACCGGC
TTCTTCGGCG TCGAGCTCGA AGCACGCCAC GTCACCCTGT CCACGGGGCA GCTCGCGGCA
GCCGGCGCCT CGCTCGGTCT TGAGGCCTTC AGGTTCCCGG CGATCTGGTG GTGCATGGCC
GCGATTCCCC TGATTGGCGC ATTGAACCTC GGCGTGAGCT TCTACCTCGC CTTCCGCCTG
GCCCTGCAGG CGCACAACGT CAGCGGTGTG GACCGCGCCC GCATCCGCGC AGCCATCTGG
GCCCGCTGGC GCACCCATCC GCGCAGCTTT TTCATGCCAG CGCAGTACCG TTGA
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| Protein sequence | MKDLPTLLGA LDPEADLTGR HVWLISLFAW IRGDQTSVAA AVARVQAFLE AVEAQPEFQR
RLQAWWQQLI QTLDITTLLA DFGFAPRTAF VSELGERLRR KMLPGTPETS DASELFPLVA
SRRFDAQWMA ALEEPQIERL ARLLSANPQL DTLHWQYSLV DALTYCTAQI RATGFAPELR
LRMDRATPHA RAFHALPSDV EELRSIFFRP ERDEAQLQAA LTQYRGRLDA CRQAVNSVYA
HIEENGISVG MVFRLRQLRE RMMRVRELLD ALLSPKPAMA ALKLLVRRVI IGHDSKSIGA
LISANSTLLS AKMAERSAET GERYITRNRE EYREMLGKAM GGGAVTAFTT LLKFMVVGIG
LSAFWSGFWA SVAYAGTFVM IQLLHFTLAT KQPAMTAPAM AAKLKDIGSA EATNAVEDFV
DEVTHLVRSQ VAAVFGNVFM VVPAVLLINA LILLLLGHPM ISHDEARHIL ATLTLLGPTL
LWAAFTGVLL FSASMIAGWA ENWFVLHRLD SAMRHNPRFT SALGTERAAR WSAFMRENIS
GFASNIALGF MLGLIPAFTG FFGVELEARH VTLSTGQLAA AGASLGLEAF RFPAIWWCMA
AIPLIGALNL GVSFYLAFRL ALQAHNVSGV DRARIRAAIW ARWRTHPRSF FMPAQYR
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