Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4451 |
Symbol | trpC |
ID | 4012877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4705220 |
End bp | 4706014 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637944104 |
Product | indole-3-glycerol-phosphate synthase |
Protein accession | YP_551236 |
Protein GI | 91790284 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0983396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACA TCCTCGACAA GATCATTGCC GTCAAGCGCG AAGAAATCGC GCAGGCCATC AAACGCAAGC CGCTGGCCGT GGTGCGCGAA GACGCCGAAT CGCGTGTGCT CACGCGGGAC TTTGTCGGCG CGCTGCGCGC CAAAATCTCG GCGGGCAAGC CGGCGGTGAT TGCCGAAGTC AAAAAGGCCA GCCCGTCCAA GGGCGTGCTG CGGGCCGACT TCATTCCGGC CGACATTGCG CAAAGCTATG CGGAGCATGG CGCGGCCTGC CTGTCCGTGC TCACCGACCG GCAGTTTTTC CAGGGCAGTG TGGACTACCT GAAACAGGCC CGGGCCTCGT GCGCCCTGCC GGTGCTGCGC AAGGATTTCA TGGTCGACGC CTACCAGGTG TACGAGGCCC GCGTGATGGG GGCCGACTGC ATTTTGCTGA TTGTCGCCTG CCTGGACGAC GCGCAGATGA AGGCGCTGGA AGCGCTGGCG TTCTCGCTGG ACATGGCGGT GCTGGTCGAG GTGCACGACG AGGCCGAGCT GGAGCGGGCG CTGAAGCTCA GGACACCGCT GGTCGGCATC AACAACCGCA ACCTCAAGAC CTTTGAGGTC TCGCTGGACA ATACCCTGAG TCTGCTCGGC AAAGTACCGG CAGACCGCCT GCTGGTCACG GAATCCGGCA TTTCCACCCC GGCCGACGTC AAGCGCTTGC GTGAGGCCAG GGTCAACGCC TTCCTGGTCG GCGAAGCCTT CATGCGGGCA GAAGATCCCG GCGTCGCGCT GGCTCAACTT TTCGGGCTGG ACTGA
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Protein sequence | MSDILDKIIA VKREEIAQAI KRKPLAVVRE DAESRVLTRD FVGALRAKIS AGKPAVIAEV KKASPSKGVL RADFIPADIA QSYAEHGAAC LSVLTDRQFF QGSVDYLKQA RASCALPVLR KDFMVDAYQV YEARVMGADC ILLIVACLDD AQMKALEALA FSLDMAVLVE VHDEAELERA LKLRTPLVGI NNRNLKTFEV SLDNTLSLLG KVPADRLLVT ESGISTPADV KRLREARVNA FLVGEAFMRA EDPGVALAQL FGLD
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