Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4449 |
Symbol | |
ID | 4012872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4702549 |
End bp | 4703739 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637944099 |
Product | elongation factor Tu |
Protein accession | YP_551234 |
Protein GI | 91790282 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000257017 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAG GCAAATTTGA GCGGACCAAG CCGCACGTCA ACGTCGGCAC GATTGGCCAC GTGGACCATG GCAAGACGAC CCTGACGGCG GCGATCACGA CCGTGCTGGC ATCCAAGTTC GGCGGCGAAG CCAAAGGTTA CGACCAGATT GACGCGGCCC CCGAAGAAAA GGCCCGCGGC ATTACGATTA ACACCGCCCA CGTCGAGTAC GAGACGGCCA ATCGCCACTA CGCCCACGTT GACTGCCCCG GCCACGCCGA CTACGTCAAG AACATGATCA CCGGCGCGGC CCAGATGGAC GGCGCCATTC TCGTTTGTTC GGCTGCTGAC GGCCCCATGC CCCAGACCCG CGAGCACATC CTGCTGGCCC GCCAGGTCGG CGTGCCCTAC ATCATCGTGT TCCTGAACAA GTGCGACATG GTCGACGACG CCGAACTGCT CGAACTCGTC GAGATGGAAG TGCGCGAGCT GCTCGACAAG TACGATTTCC CTGGCGACAA GACCCCCATC ATCCACGGCT CCGCCAAGCT CGCCATGGAA GGCGACAAGG GTCCCCTGGG CGAGCAGGCC ATCATGAAGC TGGCCGACGC CCTGGACACC TACATTCCCC TGCCCGAGCG CGCAGTCGAC GGCGCCTTCC TGATGCCCGT CGAAGACGTG TTCTCCATCT CCGGCCGCGG CACCGTCGTG ACCGGCCGTG TCGAGCGCGG CGTGATCAAG GTCGGCGAAG AGATCGAGAT CGTCGGTATT GCCGACACGC AAAAGACCAC CTGCACCGGC GTCGAGATGT TCAGGAAGCT GCTCGATCAG GGCCAGGCCG GCGACAACGT CGGTATTTTG CTGCGCGGCA CCAAGCGCGA AGACGTGCAG CGCGGCCAGG TGCTGTGCAA GCCCGGCTCG ATCAAGCCGC ATACCCACTT CACCGGCGAG ATCTACGTGC TGAGCAAGGA CGAAGGCGGC CGCCACACGC CCTTCTTCAA CAACTACCGC CCCCAGTTTT ACTTCCGCAC GACGGACGTG ACCGGCGCGA TCGAGTTGCC AGAAGGCAAG GAAATGGTCA TGCCAGGCGA CAACGTGTCG ATCACCGTCA AGCTGATCAA CCCGATCGCC ATGGAAGAGG GCCTGCGCTT TGCCATCCGC GAAGGCGGCA AGACCGTTGG TGCTGGCGTT GTGGCCAAGA TCATTGCCTG A
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Protein sequence | MAKGKFERTK PHVNVGTIGH VDHGKTTLTA AITTVLASKF GGEAKGYDQI DAAPEEKARG ITINTAHVEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI LLARQVGVPY IIVFLNKCDM VDDAELLELV EMEVRELLDK YDFPGDKTPI IHGSAKLAME GDKGPLGEQA IMKLADALDT YIPLPERAVD GAFLMPVEDV FSISGRGTVV TGRVERGVIK VGEEIEIVGI ADTQKTTCTG VEMFRKLLDQ GQAGDNVGIL LRGTKREDVQ RGQVLCKPGS IKPHTHFTGE IYVLSKDEGG RHTPFFNNYR PQFYFRTTDV TGAIELPEGK EMVMPGDNVS ITVKLINPIA MEEGLRFAIR EGGKTVGAGV VAKIIA
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