| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4441 |
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| Symbol | |
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| ID | 4012897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4690162 |
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| End bp | 4694388 |
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| Gene Length | 4227 bp |
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| Protein Length | 1408 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637944090 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_551226 |
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| Protein GI | 91790274 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.317154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAT TACTCGACCT GTTCAAGCAA TTCACGCCGG ATGAGCATTT CGATGCCATC
AAGATCGGCA TGGCCTCGCC CGAGAAGATC CGTTCGTGGT CTTTCGGCGA AGTCAAAAAG
CCTGAAACCA TCAACTACCG CACCTTCAAG CCAGAGCGCG ACGGTCTTTT TTGCGCCAAG
ATCTTTGGCC CCATCAAGGA CTACGAATGC CTGTGCGGCA AGTACAAGCG CCTCAAGCAC
CGCGGCGTCA TCTGCGAGAA GTGCGGCGTT GAAGTCACGC AGACCAAGGT CCGCCGTGAG
CGCATGGGTC ACATCGACCT GGCCGCTCCC TGCGCGCACA TCTGGTTCCT GAAGTCGCTG
CCGTCGCGTC TGGGCCTGGT GCTCGACATG ACGCTGCGCG ACATCGAGCG CGTGCTGTAC
TTCGAAGCTT ACGTGGTGAC CGACCCCGGC ATGACCCCGC TGAAGAAATT CAGCATCATG
TCGGAAGACG ACTACGACGC CAAGCGCAAG GAATACGGTG ATGAGTACGT CGCCAAGATG
GGCGCCGAAG GCATCAAGGA CCTGCTCGAA GGGCTCGACC TCGACGTCGA GATCGACAAG
CTGCGCAACG ACCTGACCGG TTCCGAAATC AAGATCAAGA AAAACGCCAA GCGTTTGAAA
TTGATGGAAG CGTTCAAGAA GTCCGGCATC AAGCCCGAGT GGATGGTGCT GGACGTGCTG
CCTGTGCTGC CGCCGGACCT GCGTCCGCTG GTGCCGCTGG ACGGCGGCCG CTTCGCGACC
TCCGACCTGA ACGACCTGTA CCGCCGCGTC ATCAACCGCA ACAGCCGCCT GCGCCGTCTG
CTGGAGCTCA AGGCTCCCGA GATCATTGCC CGCAATGAAA AGCGCATGCT GCAGGAAGCG
GTGGATTCGC TGCTGGACAA CGGCCGCCGT GGCAAGGCCA TGACGGGCGC CAACAAGCGC
GCGCTGAAGT CGCTGGCCGA CATGATCAAG GGCAAGTCAG GCCGTTTCCG CCAGAACTTG
CTGGGCAAGC GCGTCGACTA CTCCGGCCGT TCCGTGATCA CCATGGGCCC GACGCTCAAG
CTGCACCAGT GCGGCTTGCC CAAGCTGATG GCGCTCGAGC TGTTCAAGCC TTTCATCTTC
TCGCGTCTCG AAGCCATGGG CATCGCGACC ACCATCAAGG CGGCCAAGAA GGAAGTCGAA
TCCGGCACGC CAGTGGTGTG GGACATCCTG GAAGAGGTTA TCAAGGAGCA CCCCGTGATG
CTGAACCGTG CGCCTACGCT GCACCGTCTC GGTATCCAGG CCTTTGAACC CATCCTGATC
GAAGGCAAGG CCATCCAGCT GCACCCGCTC GTCTGCTCGG CCTTCAACGC CGACTTTGAC
GGTGACCAGA TGGCCGTTCA CGTGCCGCTG TCGGTGGAAG CGCAGATGGA AGCCCGCACG
CTGATGCTGG CTTCGAACAA CATCCTGTTC CCGGCCAACG GCGAGCCCTC CATTGTTCCG
TCGCAAGACG TGGTGCTGGG CCTGTACTAC ACGACCCGCG ACCGTACCAA CGGCAAGGGT
GAAGGCCTCG TGTTCTCGGA CACCGGTGAG GTGCGCCGTG CATTCGATGC GGGCGAACTG
GACCTGAACG CCAGGATCAG CGTGCGCCTG ACCGAATGGA CCAAGAACAA GGAGACCGGC
GAGTTCATCC CGTCGACCAA GCTGTGGGAA ACCACCGGTG GCCGTGCGCT GCTGTCTGAA
ATCCTGCCCA AGGGCCTGCC TTTCTCTAAC ATCAACAAGG CGTTGAAGAA AAAGGAAATC
TCCAAGCTGA TCAACGTGTC TTTCCGCAAG TGCGGCCTGA AAGAGACGGT GGTGTTTGCC
GACAAGCTGC TGCAGTCGGG CTTCCGCCTG GCCACCAAGG CCGGCATCTC CATCTGTATC
GACGACATGC TGGTGCCCAA GGAAAAGCAC GACATCATTT CGCGTGCCCA GAAGGAAGTC
AAAGAGATCG AGCAGCAGTA TGTCTCGGGC CTGGTGACAT CCGGCGAGCG CTACAACAAG
GTGGTTGACA TCTGGGGCAA GTCCGGCGAC GAAGTCTCCA AGGTCATGAT GGCCCAGCTT
TCGAAAGAAA AAGTCATCGA CCGCCACGGC AAGGAAGTCG AGCAGGAATC CTTCAACTCC
ATCTACATGA TGGCCGACTC CGGCGCCCGC GGTTCTGCCG CGCAGATTCG CCAGGTGGCC
GGTATGCGGG GTCTGATGGC CAAGCCTGAC GGCTCCATCA TCGAGACGCC GATTACCGCG
AACTTCCGCG AAGGCCTGAA CGTGCTGGAG TACTTCATCT CCACCCACGG TGCCCGTAAG
GGTTTGGCTG ACACCGCGCT GAAAACGGCC AACTCCGGCT ACCTGACGCG TCGCCTGTGC
GACGTGGTGC AGGATCTGGT GGTGACCGAA GACGACTGCG GCACGCAAGA GGGCTCGCTG
ATGCGCGCCA TCGTCGAGGG TGGTGAGGTG ATCGAATCGC TGCGCGAACG TATCCTCGGC
CGCACCGCGG TGGAAGATGT GCTGCATCCC GAGAACCGCT CGGTTCTGGC CAAAGCCGGT
GCCATGCTGG ACGAAGACCT GATCGACGAA CTCGAAGCGG CCGGCGTCGA CGAAGTGAAA
GTGCGCACGG CCCTGACCTG CGAAACCCGC TTCGGCCTGT GCGCCAAGTG CTACGGCCGC
GATCTGGGCC GCGGTGGCCT GATCAACATC GGTGAGGCGG TCGGTATCAT CGCCGCCCAG
TCGATTGGTG AGCCCGGCAC GCAGCTGACC ATGCGTACCT TCCACATCGG CGGTGCTGCG
TCGCGTGCGG CGATTGCCTC CAGCGTCGAA GCCAAGTCCA ACGGCGTGAT CGGTTTCAAT
GCCCCGATGC GTTATGTGAC CAACGGCAAG GGCGAACTGG TGGTGATTGC CCGTTCCGGC
GAGATCGTCA TCCATGACGA GCACGGCCGC GAGCGTGAGC GTCACAAGGT GCCGTACGGT
GCCACATTGA CGGTCAAGGC CGACCAGACC ATCAAGGCTG GCGCCATCCT GGCCAACTGG
GATCCGCTGA CGCGCCCCAT CATTACCGAA TTCGCCGGCA AGGTGCTGTT CGAGAATGTG
GAAGAAGGCG TCACCGTGGC CAAGCAGGTT GACGATGTGA CGGGTCTGTC CACCCTGGTG
GTGATCGATC CGAAACGCCG CGGCGCGACC AAGGTGATTC GTCCCCAGGT CAAACTGATC
GACGCGACCG GCAACGAAGT CAAGATCCCC GGCACCGATC ACTCGGTGAC GATCGGCTTC
CAGGTGGGTG CGCTGGTTCA GGTGCGCGAC GGCCAGGACG TGGGCCCCGG CGAAGTGCTG
GCCCGTATCC CGGTCGAAGG CCAGAAGACC CGCGACATTA CCGGCGGTCT GCCGCGCGTG
GCCGAGCTGT TCGAAGCCCG TACGCCGAAA GACAAGGGCA CGCTGGCCGA GATGACCGGT
ACCGTGTCGT TCGGTAAAGA GACCAAAGGC AAGGTTCGCC TGCAGATCAC CGATCCGGAC
GGCAAAGTCT GGGAAGACCT CGTGCCCAAG GAGAAGAACA TTCTCGTGCA CGAAGGCCAG
GTGGTGAACA AGGGCGAGTC GATTGTGGAC GGCCCGGCCG ACCCGCAAGA CATCCTGCGT
TTGCTGGGCA TGGAAGAGCT GGCCCGCTAC ATCGTCGACG AAGTGCAGGA CGTTTACCGC
CTGCAGGGCG TGAAGATCAA CGACAAGCAC ATCGAAGTGA TTGTTCGCCA GATGCTGCGC
CGTGTCGTCG TCGAAAACGT GGGCGACTCC AGCTACATCG CCGGTGAGCA GGTTGAGCGT
TCGGCCATGC TGGATGCCAA CGACGCCTTG CGCGCCGAGG GCAAGATCCC GGCAACCTTC
AGCAACCTGC TGCTCGGTAT CACCAAGGCC TCGCTGTCGA CCGATTCGTT CATTTCCGCG
GCTTCCTTCC AGGAAACCAC CCGCGTGCTC ACCGAGGCTG CCATCATGGG CAAGCGCGAC
GAGCTGCGCG GTCTGAAGGA AAACGTGATC GTCGGCCGCC TGATTCCAGC CGGTACCGGC
ATGGCCTACC ACGAGGCACG CAAAGCCAAG GACCTGATGG ACGACGCCGA GCGCCGTGCC
ATTGCCGAAG CTGAAGCCGC TGAACTGGAG GCTGCGACAG CCACGGCACC TGCCGATGCG
GGCGGCGACA GTCCTGCAAC CGAGTAA
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| Protein sequence | MKSLLDLFKQ FTPDEHFDAI KIGMASPEKI RSWSFGEVKK PETINYRTFK PERDGLFCAK
IFGPIKDYEC LCGKYKRLKH RGVICEKCGV EVTQTKVRRE RMGHIDLAAP CAHIWFLKSL
PSRLGLVLDM TLRDIERVLY FEAYVVTDPG MTPLKKFSIM SEDDYDAKRK EYGDEYVAKM
GAEGIKDLLE GLDLDVEIDK LRNDLTGSEI KIKKNAKRLK LMEAFKKSGI KPEWMVLDVL
PVLPPDLRPL VPLDGGRFAT SDLNDLYRRV INRNSRLRRL LELKAPEIIA RNEKRMLQEA
VDSLLDNGRR GKAMTGANKR ALKSLADMIK GKSGRFRQNL LGKRVDYSGR SVITMGPTLK
LHQCGLPKLM ALELFKPFIF SRLEAMGIAT TIKAAKKEVE SGTPVVWDIL EEVIKEHPVM
LNRAPTLHRL GIQAFEPILI EGKAIQLHPL VCSAFNADFD GDQMAVHVPL SVEAQMEART
LMLASNNILF PANGEPSIVP SQDVVLGLYY TTRDRTNGKG EGLVFSDTGE VRRAFDAGEL
DLNARISVRL TEWTKNKETG EFIPSTKLWE TTGGRALLSE ILPKGLPFSN INKALKKKEI
SKLINVSFRK CGLKETVVFA DKLLQSGFRL ATKAGISICI DDMLVPKEKH DIISRAQKEV
KEIEQQYVSG LVTSGERYNK VVDIWGKSGD EVSKVMMAQL SKEKVIDRHG KEVEQESFNS
IYMMADSGAR GSAAQIRQVA GMRGLMAKPD GSIIETPITA NFREGLNVLE YFISTHGARK
GLADTALKTA NSGYLTRRLC DVVQDLVVTE DDCGTQEGSL MRAIVEGGEV IESLRERILG
RTAVEDVLHP ENRSVLAKAG AMLDEDLIDE LEAAGVDEVK VRTALTCETR FGLCAKCYGR
DLGRGGLINI GEAVGIIAAQ SIGEPGTQLT MRTFHIGGAA SRAAIASSVE AKSNGVIGFN
APMRYVTNGK GELVVIARSG EIVIHDEHGR ERERHKVPYG ATLTVKADQT IKAGAILANW
DPLTRPIITE FAGKVLFENV EEGVTVAKQV DDVTGLSTLV VIDPKRRGAT KVIRPQVKLI
DATGNEVKIP GTDHSVTIGF QVGALVQVRD GQDVGPGEVL ARIPVEGQKT RDITGGLPRV
AELFEARTPK DKGTLAEMTG TVSFGKETKG KVRLQITDPD GKVWEDLVPK EKNILVHEGQ
VVNKGESIVD GPADPQDILR LLGMEELARY IVDEVQDVYR LQGVKINDKH IEVIVRQMLR
RVVVENVGDS SYIAGEQVER SAMLDANDAL RAEGKIPATF SNLLLGITKA SLSTDSFISA
ASFQETTRVL TEAAIMGKRD ELRGLKENVI VGRLIPAGTG MAYHEARKAK DLMDDAERRA
IAEAEAAELE AATATAPADA GGDSPATE
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