Gene Bpro_4436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4436 
Symbol 
ID4012892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4684495 
End bp4685832 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content66% 
IMG OID637944085 
Productsun protein 
Protein accessionYP_551221 
Protein GI91790269 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGACA ACCCGACCCC AATTCCCCTG TGGCGCCAGC TTCAGGGGGC TGCTTCCCTT 
TTGATGGCCG TGCGCGATGG CCAGTCCATG ACAGCCGCGC TTGAAGACGT CGATGCCGCA
CTGCGGCCCG GCGTCCAGTC GCTGGGCTTT CACACGCTGC GCTGGCTGGG CCGCGCCGAA
GCGCTGCGCC AGCAACTGGC CAAACGCCCA CCGCCACCCG AGGCCGATGC CTTGCTGTGC
GTGGCCCTGG CGCTGATCTG GACGGAGCAC GATGCGCCCT ACACCGCGCA CACCCTGGTT
GACCAGGCGG TGGAAGCGGC CAAGCGCGGC GACGCCACGC AGCACCAGGC CAGTTTCATC
AATGGCTGCC TGCGGCGCTT CCTGCGCGAG CGGGACGACC TGGTGGCGCG CAGCGAAAAA
AGTCCCCAGG CCGTCTGGAA CCACCCGCAG TGGTGGATAG ACCGGGTGCG CAAGGATCAC
CCCGGCCAAT GGCAGGCCAT CCTGCAGGCC AACAACTCCC GGGCACCGCT GATTCTGCGG
GTCAACGAAC GAAAGACGAC GCAAGCCCAG TATTTGCTGG CACTGTCTGC TGTGAATATT
GCAGCGACCC CGGTGGGAAA ACAGGGTGTG ATCCTGGCCA GCGCCCAGCC TGTGCCGTCG
CTGCCGGGTT TTGCCGAGGG GCATTTTTCG GTACAGGATG CCGCTGCGCA GCTCGCCGCG
CCGCTGTTGC TCGAGGGGCT GAACACCGGC GACGGGCAGG GGGCGCGCCC GAGGATCCTG
GACGCCTGCG CCGCGCCCGG CGGTAAAACC GCCCACCTGC TGGAGCTGGC CGACTGCGAG
GTCACCGCGC TCGACATCGA CGCCCGCCGT TGCACGCGCA TCGCACAAAA CCTGGGGCGC
CTGGGCCTGC AGGCGCACAT CGAGGTGGCC GATGCAGGCC GCCCGCAGGA CTGGTGGGAC
GGCCAGCCTT ACGACGGCAT CCTGCTCGAC GCGCCTTGTA CTGCCTCGGG CATTGTGCGG
CGCCATCCCG ACGTGCGCTG GCTGCGCCGG CCGACCGACA TTGCCCAGCT GGCCGGCATC
CAGGCGCATT TGCTCCAGGC GCTGTGGCCG CTGCTCAAGC CGGGTGGCCG GCTGTTGTAT
TGCACCTGCT CGGTTTTCCG GGCGGAAGGC GACAACCAGA TACAAACGTT TGTTGCACAC
CACACAGATG CTTTATTAAT GCCATCGCCA GGGCATTTGC TGCCCCAAAG TGGGGCCGAA
GCGACAGTCT TCCCGGACAA TTTGATGCGT GAGCACGACG GTTTTTATTA CGCCATTCTT
GAAAAACGCA ACCCTTAG
 
Protein sequence
MQDNPTPIPL WRQLQGAASL LMAVRDGQSM TAALEDVDAA LRPGVQSLGF HTLRWLGRAE 
ALRQQLAKRP PPPEADALLC VALALIWTEH DAPYTAHTLV DQAVEAAKRG DATQHQASFI
NGCLRRFLRE RDDLVARSEK SPQAVWNHPQ WWIDRVRKDH PGQWQAILQA NNSRAPLILR
VNERKTTQAQ YLLALSAVNI AATPVGKQGV ILASAQPVPS LPGFAEGHFS VQDAAAQLAA
PLLLEGLNTG DGQGARPRIL DACAAPGGKT AHLLELADCE VTALDIDARR CTRIAQNLGR
LGLQAHIEVA DAGRPQDWWD GQPYDGILLD APCTASGIVR RHPDVRWLRR PTDIAQLAGI
QAHLLQALWP LLKPGGRLLY CTCSVFRAEG DNQIQTFVAH HTDALLMPSP GHLLPQSGAE
ATVFPDNLMR EHDGFYYAIL EKRNP