Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4436 |
Symbol | |
ID | 4012892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4684495 |
End bp | 4685832 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637944085 |
Product | sun protein |
Protein accession | YP_551221 |
Protein GI | 91790269 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGACA ACCCGACCCC AATTCCCCTG TGGCGCCAGC TTCAGGGGGC TGCTTCCCTT TTGATGGCCG TGCGCGATGG CCAGTCCATG ACAGCCGCGC TTGAAGACGT CGATGCCGCA CTGCGGCCCG GCGTCCAGTC GCTGGGCTTT CACACGCTGC GCTGGCTGGG CCGCGCCGAA GCGCTGCGCC AGCAACTGGC CAAACGCCCA CCGCCACCCG AGGCCGATGC CTTGCTGTGC GTGGCCCTGG CGCTGATCTG GACGGAGCAC GATGCGCCCT ACACCGCGCA CACCCTGGTT GACCAGGCGG TGGAAGCGGC CAAGCGCGGC GACGCCACGC AGCACCAGGC CAGTTTCATC AATGGCTGCC TGCGGCGCTT CCTGCGCGAG CGGGACGACC TGGTGGCGCG CAGCGAAAAA AGTCCCCAGG CCGTCTGGAA CCACCCGCAG TGGTGGATAG ACCGGGTGCG CAAGGATCAC CCCGGCCAAT GGCAGGCCAT CCTGCAGGCC AACAACTCCC GGGCACCGCT GATTCTGCGG GTCAACGAAC GAAAGACGAC GCAAGCCCAG TATTTGCTGG CACTGTCTGC TGTGAATATT GCAGCGACCC CGGTGGGAAA ACAGGGTGTG ATCCTGGCCA GCGCCCAGCC TGTGCCGTCG CTGCCGGGTT TTGCCGAGGG GCATTTTTCG GTACAGGATG CCGCTGCGCA GCTCGCCGCG CCGCTGTTGC TCGAGGGGCT GAACACCGGC GACGGGCAGG GGGCGCGCCC GAGGATCCTG GACGCCTGCG CCGCGCCCGG CGGTAAAACC GCCCACCTGC TGGAGCTGGC CGACTGCGAG GTCACCGCGC TCGACATCGA CGCCCGCCGT TGCACGCGCA TCGCACAAAA CCTGGGGCGC CTGGGCCTGC AGGCGCACAT CGAGGTGGCC GATGCAGGCC GCCCGCAGGA CTGGTGGGAC GGCCAGCCTT ACGACGGCAT CCTGCTCGAC GCGCCTTGTA CTGCCTCGGG CATTGTGCGG CGCCATCCCG ACGTGCGCTG GCTGCGCCGG CCGACCGACA TTGCCCAGCT GGCCGGCATC CAGGCGCATT TGCTCCAGGC GCTGTGGCCG CTGCTCAAGC CGGGTGGCCG GCTGTTGTAT TGCACCTGCT CGGTTTTCCG GGCGGAAGGC GACAACCAGA TACAAACGTT TGTTGCACAC CACACAGATG CTTTATTAAT GCCATCGCCA GGGCATTTGC TGCCCCAAAG TGGGGCCGAA GCGACAGTCT TCCCGGACAA TTTGATGCGT GAGCACGACG GTTTTTATTA CGCCATTCTT GAAAAACGCA ACCCTTAG
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Protein sequence | MQDNPTPIPL WRQLQGAASL LMAVRDGQSM TAALEDVDAA LRPGVQSLGF HTLRWLGRAE ALRQQLAKRP PPPEADALLC VALALIWTEH DAPYTAHTLV DQAVEAAKRG DATQHQASFI NGCLRRFLRE RDDLVARSEK SPQAVWNHPQ WWIDRVRKDH PGQWQAILQA NNSRAPLILR VNERKTTQAQ YLLALSAVNI AATPVGKQGV ILASAQPVPS LPGFAEGHFS VQDAAAQLAA PLLLEGLNTG DGQGARPRIL DACAAPGGKT AHLLELADCE VTALDIDARR CTRIAQNLGR LGLQAHIEVA DAGRPQDWWD GQPYDGILLD APCTASGIVR RHPDVRWLRR PTDIAQLAGI QAHLLQALWP LLKPGGRLLY CTCSVFRAEG DNQIQTFVAH HTDALLMPSP GHLLPQSGAE ATVFPDNLMR EHDGFYYAIL EKRNP
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