Gene Bpro_4423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4423 
Symbol 
ID4012916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4669711 
End bp4670829 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content64% 
IMG OID637944071 
ProductFAD dependent oxidoreductase 
Protein accessionYP_551208 
Protein GI91790256 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.142284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGGCC ATCGTCACAT CGACACCCTC GTGGTGGGCG GCGGCGTGGT GGGCATGTCC 
ATCGCTTATG GATTCGCCCG CGCCGGTGAG GCCGTGTGCG TGCTCGATGG CAGCGACGAC
GCCTTTCGCG CATCACGCGG CAATTTCGGC CTGATCTGGG TGCAGAACAA GGGTCTTGGC
CGTCCTGCTT ATGCGCGCTG GACGATGCAA GCGGCACGCA CATGGCAGTC CTTGGCCACC
GAGCTGCAAG AGCTGACCGG GGTCGACGTT GAGCTGCGCC AGCCCGGAGG GCTGAGCATG
AGTTTCGATG AGAAGGTGCT GGCTGCGTCC AGCGAAAAGC TGAACGCACT CGGCAAGGAG
CTCGGCATCG TCTACCCGTA TGAGCGACTG GATGCTGACG GTCTGCGCAA GCTGACGCCG
GAAATAGGCC CAGACGTGGT TGGCGCGATC TATTGCCCGT TGGACGGGCA TGTCAGCCCA
TTGCGGACAC TTCGCGCTTT GGTTCAAGGC TTCGGGGTCC GCGGAGGCCA GTTGGTCTCC
GGCGTGAATG TCGATCGTGT CGAACGTCGT GGTGGCGAGT TCCGTGTGCA CGCTGGCAAC
AAGGTCTACA CAGCGGGCCG TGTGGTGCTG GCTGCGGGCT TGGCTAACCG CGAGCTCGCG
CCGCAAGTTG GCCTGAAGGC GCCGATACGG CCGGTGCGCG GCCAACTCCT TGTGAGCGAG
CGCGTCCAAC CCTTTCTTCA CTACCCCTGC CACTACGTCC GGCAAACGGG CGAGGGTGTG
GTGCAGATTG GCGACTCCAA GGAAGAGGTC GGCCTGGACG ACAGCACCAC GCTGGGCGAG
TTGGCGCGCA TCGCCGCGCG CGCGACGCGC ACCTTTCCGA TGCTGGCCAA CGTCAACATC
GTGCGTACCT GGGGGGCGCT ACGGGTGATG AGTCCCGACG GCTATCCCAT CTACCAGGCC
TCCACCGAAT GCCCCGGCGC CTTCGTTGTG ACCTGCCACA GCGGGATCAC GCTCGCGCCC
GCCCATGCCG GCCCTTTGGT GGATTGGATG CGAACCGGCA CCGAACCGGC GGAAATCCGG
GGTTTCAAAG CGGAGCGTTT CGATGTTCAA ACCAATTGA
 
Protein sequence
MTGHRHIDTL VVGGGVVGMS IAYGFARAGE AVCVLDGSDD AFRASRGNFG LIWVQNKGLG 
RPAYARWTMQ AARTWQSLAT ELQELTGVDV ELRQPGGLSM SFDEKVLAAS SEKLNALGKE
LGIVYPYERL DADGLRKLTP EIGPDVVGAI YCPLDGHVSP LRTLRALVQG FGVRGGQLVS
GVNVDRVERR GGEFRVHAGN KVYTAGRVVL AAGLANRELA PQVGLKAPIR PVRGQLLVSE
RVQPFLHYPC HYVRQTGEGV VQIGDSKEEV GLDDSTTLGE LARIAARATR TFPMLANVNI
VRTWGALRVM SPDGYPIYQA STECPGAFVV TCHSGITLAP AHAGPLVDWM RTGTEPAEIR
GFKAERFDVQ TN