Gene Bpro_4419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4419 
Symbol 
ID4012912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4664664 
End bp4665734 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content60% 
IMG OID637944067 
ProductABC transporter related 
Protein accessionYP_551204 
Protein GI91790252 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTTT TATCACTCCG AGCTTTGTCC AAGACGTACG GCGGCGACTC GCACGTCGTA 
CGCGAGTTGA ATCTGGACGT CGAGCGCGGC GAATTCATTT CTTTACTTGG CCCATCAGGG
TGCGGCAAGA CAACGACCCT GCAAATGGTC GCCGGGTTTG TGGTTTCAAC TTCAGGCCGC
GTCCATCTGA ATGGCAAAGA CATCACCGAG GTTCGCCCCG AAAAGCGGGA CATGGGTTTG
GTGTTCCAGA GCTACGCGCT GTTTCCCCAT ATGACCGTCG CCGAGAACAT CGGCTTCGGC
CTGGAAATGC GAAAGCTCGC TCGCCCGCAG GCGGCCAGCC GTATTGAGGA ATCCTTGGAG
CTGGTCCGAC TGGGTGGCCT CGGCAAGCGA TATCCGCGTG AACTTTCGGG CGGTCAACGT
CAGCGAGTCG CGATTGCCCG CGCCCTGGCG ATACGTCCCC AGGTGCTGTT GCTGGACGAG
CCCATGTCCA ATCTGGATGC CAAGCTGCGC GGCGAAATGC ATGTTGAGCT GCGTGGCCTT
CAGCGGCAGC TCGGCATCAC AACCATTCTC GTGACGCACG ACCAAGTCGA AGCCATGACG
ATGAGCGACC GTATCGCCGT GATGAGCGAG GGCAAGATCG CACAGCTCGG GACACCTTTC
GAGGTGTATG ACCGACCGGC CTCCGGCTTT GCATCCAGCT TCCTGGGCCA AACCAATGTC
ATTCCGGGCC GGGTTACTGA AATGCGCGAA CACTGCGCGA TCGTTCAGGC AGGCCCCTGC
ACCATGCGAA TCCCGCACGC AGGAACCAAT ATCAGTGGGG AGGTCGGCGT TTACATCCGG
CCAGAGCGCT TGCGTTTGGC TGCAGCAGGG CAAGGCAACC TGCCAGGCAA GGTGACCACC
CGGCTTTTTC TTGGCAACCA TTGGCTCTAC GAAATCGAAA GCGTACTGGG TACGCTGCGT
CTGACATCGA CAAATCTGGG CGACCACCTT CCCGGAGAAG GCGAGAACAT CGGCCTGGTC
TGGCGCGATG ACGACCTGCG TGCCATCCCC AGCGAGCGTG CCCATGGCTG A
 
Protein sequence
MSFLSLRALS KTYGGDSHVV RELNLDVERG EFISLLGPSG CGKTTTLQMV AGFVVSTSGR 
VHLNGKDITE VRPEKRDMGL VFQSYALFPH MTVAENIGFG LEMRKLARPQ AASRIEESLE
LVRLGGLGKR YPRELSGGQR QRVAIARALA IRPQVLLLDE PMSNLDAKLR GEMHVELRGL
QRQLGITTIL VTHDQVEAMT MSDRIAVMSE GKIAQLGTPF EVYDRPASGF ASSFLGQTNV
IPGRVTEMRE HCAIVQAGPC TMRIPHAGTN ISGEVGVYIR PERLRLAAAG QGNLPGKVTT
RLFLGNHWLY EIESVLGTLR LTSTNLGDHL PGEGENIGLV WRDDDLRAIP SERAHG