| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4416 |
|---|
| Symbol | |
|---|
| ID | 4012909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 4661759 |
|---|
| End bp | 4662895 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637944064 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_551201 |
|---|
| Protein GI | 91790249 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.426575 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.912547 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACAC AAGAATTGGT AGTGATTGGC GGGGGCTTGG TCGGCGCTGC CATCGCCTAC
GGGGCCGCCC GGGCCGGCGC CCCCGTGACC CTGCTTGACC AAGGCGATAT CGCACATCGC
GCCTCACGCG GAAATTTTGG TCTGGTGTGG GTGCAGAGCA AAGGCGACAA GGTGCCGCGC
TATGCGCGCT GGAGCCGTGA CGCTCTGACA TTTTGGCCCG CGCTGGCCAA AGAGTTGCTC
GAACTCACCG GTGTTGACGT AGCCCTGCAC CAGCCCGGAG GCTTCTGGAT TGGTTTTAGC
GAAGCCGAGA TGCAGGCGCG TGAGGCCATG CTGGAACGAA TCAATAGCTC AGTAGGGGGC
ATTCCCTATG AAATGCTCGA CCACGCCGCG CTCAAGGCGC GCCTTCCGGC CATTGGTCCT
ACGGTCGCGG GAGGCAGCTA CTGCCCGCTA GACGGTCATG CTAATCCGCT CATGCTCTTG
CACGCCCTCC ATGCCGGCCT TAAGGCACGC GGTGCGCGAG TGGTCTCTAG TGTTGATGTC
GCGCAAATCA CATACCAGGA GAAAGGCACT GGCTTTGAAA TCAAGAGCAA GGACGGAAAG
AGCTGGCACG CCCCGCGCGT TGTACTCGCC GCTGGCTTGG GCAACAACGA ACTCGCTCCT
CAGGTCGGCC TGCATGCACC GGTTTTGCCG AACAGAGGGC AAGTTCTCAT TACCGAAAGG
CTCAAGCCTT TTTTGCCCTA TCCCACCAAC AAGGCAAGGC AAACCAACGA AGGCAGTGTC
CAGTTGGGTT ATTCGGTCGA AGACGTCGGA CTGGATGACA GCACCACAGT CTCTGCCGTT
GAATGGATCG CCAAACGCGC GGTGACTACC TTTCCCATTC TTTCCAGCGT GCGCCTCGTC
CGCGCCTGGG GTGCCTTGCG GGTACTGACA CCGGATGGCC TGCCGATCTA CCAAGAGTCG
GTGTCGTGTC CAGGCGCATT CGTGGCGACC AGTCATAGCG GCGTATCGCT AGCGGCCGCC
CATGCTCACG TGATTGGACC TTGGGTGGCC GGGCTGGGTG CCGCGCCTGA TGCCTTCGAA
GTATTTGCAG GGGAACGATT TCTGGACCCC AACCGGAGCT TTTCAAATGC ACACTAA
|
|---|
| Protein sequence | MQTQELVVIG GGLVGAAIAY GAARAGAPVT LLDQGDIAHR ASRGNFGLVW VQSKGDKVPR
YARWSRDALT FWPALAKELL ELTGVDVALH QPGGFWIGFS EAEMQAREAM LERINSSVGG
IPYEMLDHAA LKARLPAIGP TVAGGSYCPL DGHANPLMLL HALHAGLKAR GARVVSSVDV
AQITYQEKGT GFEIKSKDGK SWHAPRVVLA AGLGNNELAP QVGLHAPVLP NRGQVLITER
LKPFLPYPTN KARQTNEGSV QLGYSVEDVG LDDSTTVSAV EWIAKRAVTT FPILSSVRLV
RAWGALRVLT PDGLPIYQES VSCPGAFVAT SHSGVSLAAA HAHVIGPWVA GLGAAPDAFE
VFAGERFLDP NRSFSNAH
|
|---|
| |