| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4405 |
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| Symbol | |
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| ID | 4012937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4648454 |
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| End bp | 4649431 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637944053 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_551190 |
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| Protein GI | 91790238 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.271633 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCGT ATATCCTGCG CCGTCTCTTG TCGGCATTGC TCACGCTATT GGGCGTGGCG
GTGATTCTCT TCGTGCTGTT CCGGATGATG CCGGGTGATC CAACTGCGCA GATCATCAGC
CCCGCCCTCG ATGCGGCAGC TCAGGACCGC CTCAAGCAGG CGTTTGGTTT GGATCTTCCG
GTGTGGCAAC AATTCATCAT ATACCTGAAG AACACGGCAA CGCTTGAGTG GGGCCGGTCC
TTCACCACCG GCCAGCCGGT CGCTAGTTTG CTAGGGGGCT GGCTGGTCAA TACGCTGCTG
TTGATGAGCA CCGGACTTGT CTTGGCGATT TCTCTAGGCG TTGTGCTTGG CATTTTTATG
GCGGCACGTC GCGGCGGCCC CCTCGATAAC GGCGCCACCG TTCTGGGGCT CGTTTTTCAG
GCCTCACCGC CCTTCGTGAT CGGGATCCTA CTGCTTATGG GGCTGAGCTA TCAGTTCGAG
ATTTTCCCGT CAGGAGGGAT GTTCACGCCT GGCGCCGACC CAGGTAACAC CTGGGCGCTC
ATCACTTCGA AGGATTTTCT AGAACACCTG GTCCTGCCAA CGCTCACGAT CACCGCGCTC
TATTTGTCCA CGCCGATGCT GGTGATGCGC GATTCGATGC TCGAGGTGCT GGGTTCGGAT
TTCGTCGAAT TCGCCCGTGC GAAGGGGCTG AGTCCGGTCC GTGTGCTGTT TCGCCACGCT
GCGCGCAACG CTCTGTTGGC GGTGGTCACG GTTTCTTCGC TGATCCTGGG CTTTGCAATC
GGCGGACAGA TCGTGATCGA GACCGTCTTC TCGTGGCCGG GGATGGGCAA GGCCATGGTC
GACGCCGCAA TGCAACACGA CTACCCGGTC GCTCAGGCGG CATTCTTCCT AATGGCAGCA
GTAGTGATTG GTTTGAACTT CATCACCGAT CTCTCCTATA GCCTCCTCGA CCCACGCATC
CGGCTTGGAA CCACATGA
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| Protein sequence | MTAYILRRLL SALLTLLGVA VILFVLFRMM PGDPTAQIIS PALDAAAQDR LKQAFGLDLP
VWQQFIIYLK NTATLEWGRS FTTGQPVASL LGGWLVNTLL LMSTGLVLAI SLGVVLGIFM
AARRGGPLDN GATVLGLVFQ ASPPFVIGIL LLMGLSYQFE IFPSGGMFTP GADPGNTWAL
ITSKDFLEHL VLPTLTITAL YLSTPMLVMR DSMLEVLGSD FVEFARAKGL SPVRVLFRHA
ARNALLAVVT VSSLILGFAI GGQIVIETVF SWPGMGKAMV DAAMQHDYPV AQAAFFLMAA
VVIGLNFITD LSYSLLDPRI RLGTT
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