| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4404 |
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| Symbol | |
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| ID | 4012936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4647276 |
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| End bp | 4648457 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637944052 |
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| Product | mandelate racemase/muconate lactonizing enzyme |
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| Protein accession | YP_551189 |
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| Protein GI | 91790237 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR01927] o-succinylbenzoic acid (OSB) synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.167942 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCG AAAGAAACAG AATGGCAGAA AGACTCAGTA CCGTGGCGAT GGCGCCGGTG
ATCGCAGCAG AGGTGTTCGA AATTGAAGCT GCGTTCGTTA CGCCCTACAA GCTGTCCACC
GGCACGTTGG CTACAACACG CGCAGTGTTG CTCAAATTGA CCGACGCCGA CGGCGTTGAG
GGTTGGGGAG AGGCCAATCC CAGCGAGGCC TTTACTGGAG AGTCGTCCGG TGACGCCGCG
AGGGCTCTTA AGGACGTGCT GTTGCCGGCG GTGCTCGCTT CTGCTGATCC CCAACCGGGT
CGCATTGATG CGGCACTGGA CGCACTGCTG CCCAAGCACC TTTGTGCCAA AGGTGCGGTG
AGCATGGCGC TGCTCGATCT CCTCGGAAAA CGGCTGCGTG TACCTGTTGC AACGCTACTG
GGTGGGACGC TACGCAAATC GCTTCCGGTA CTGTGGCCAC TCAACAATGG TACCGCCGAG
GACGATATCC GCGTGATCGA CGAGCGGGCG GCTCAAGGTT TTTCGAGCTT CATGCTAAAG
ATGGGCACGT CACCGGTGCG TGATGAGGTG CAGCGGGTTG CTACGCTCGA GGCCCGCTAC
GGGAAACGTG TAGCGCTCAT CGCCGACGCC AACCAGGGCT GGAGCCGTGA CGAAGCGCGA
GAGTTCCTGG ACGGGGTCCG AGGCTCTCAA CTTGCGTTCG TCGAACAGCC CGTAGTGAAG
GACGACCTCG AGGGTATGGC GCTGCTGGCG AGTGGCAGCA CGTTGCAGAT ATCAGCCGAC
GAGTCGGTGG TTGGACTCGC GCACGCCGCC CGCATCGCTA GTCTCGGGGC CGCCAGTGTC
TTCAGCATCA AGAGCAGCAA GAACGGCGGG CCTCTGCGTG CCCAACGCAT CGCCGCGGTG
GCAGAGGCCT TCGGGATTCG CTGCTACATG AATTCGATGC TGGAGTTCGG TATCACGCAG
GCGGCTTCGT TGCAGCACGC CGTGACTATT GGAAACCTTG TTGACTTTGG GCACGCCTAC
ATGTCCACCT TGCGCCTCGC GGAGGATCCC ACCGATTTTT CTTCGTTTGT GCGCGATGGG
GTAGTGCACT TTCCCGGCAC TACCGGCTTG GGTATCCAGG TTGACGAGCC TCACGTTCGC
CGCCTGGCAG TGGACAGCTT CATTCTTGGG GCACAACGGT GA
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| Protein sequence | MTTERNRMAE RLSTVAMAPV IAAEVFEIEA AFVTPYKLST GTLATTRAVL LKLTDADGVE
GWGEANPSEA FTGESSGDAA RALKDVLLPA VLASADPQPG RIDAALDALL PKHLCAKGAV
SMALLDLLGK RLRVPVATLL GGTLRKSLPV LWPLNNGTAE DDIRVIDERA AQGFSSFMLK
MGTSPVRDEV QRVATLEARY GKRVALIADA NQGWSRDEAR EFLDGVRGSQ LAFVEQPVVK
DDLEGMALLA SGSTLQISAD ESVVGLAHAA RIASLGAASV FSIKSSKNGG PLRAQRIAAV
AEAFGIRCYM NSMLEFGITQ AASLQHAVTI GNLVDFGHAY MSTLRLAEDP TDFSSFVRDG
VVHFPGTTGL GIQVDEPHVR RLAVDSFILG AQR
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