| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4401 |
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| Symbol | |
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| ID | 4012933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4644373 |
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| End bp | 4645350 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637944049 |
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| Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like |
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| Protein accession | YP_551186 |
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| Protein GI | 91790234 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.433175 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACTCT TAAGCGTAGA ACACCTAACA AAGCACTTCA GTCTCGGACG CGATCTCGGC
GCCGTGCTGC GTCGGCAACC GTCCAACTGG ATTAAACCGG TCGAAGACGT GAGCTTTTCT
ATTGGCGAAG GCGAGATACT GGGTATCGTG GGCGAATCCG GTTGTGGCAA GTCCACCACT
TGCAACCTCA TCTCGAAGCT TGACGATGCA ACGAGCGGGA AAATCCTGTT TGACGGAGAG
GACGTCACAC ATCTGAGTAA GACAGCGCTT GCTCGCTATC GCGCCCAAGT TCAGCTGATC
TTTCAGGATC CTTTCGACTC GCTCAACCCG CGGCTGAAGG TCTTCGACAT CGTGGCCGAA
GCGCCGCGCG CCCTCAAGCT GTGGGACGAG GTCGAGATTG CGCGTCGTGT TCCTGAAATG
TTGGCATTGG TCGGGCTTCC CCCGGAGCGG TACGCGCAGC GGTACCCACA CCAGTTGAGC
GGCGGCGAGC GTCAACGCGT CGGCATTGCG TCCGCGCTGG TTCCGGAACC GAGATTGGTG
ATTGCTGATG AGCCGGTTTC CATGCTTGAC GTATCAATTC GCGCGGGCGT CATGGACTTG
TTGCGCGACC TCTCGACCCG GCTCAATTTC TCATGCCTCT ACGTGTCGCA TGACCTCTCA
ATCCTCACTC ATCTTTGCGA CCGGGTGATG GTGATGTATC TCGGACAGCT CGTGGAAGTA
GCCAGCTCGC ACGACCTCGT GAATTCGCCA AGGCATCCTT ATACGCGCGC GTTGGTGGCG
GCGGTTCCAG TGCCTGATCC TGCCTACCGG CGGAAACCGG TTGAGATCAT GGGCGAACTT
GCCAAACCGG TCAATCCGCC CCCGGGGTGC CGCTTTGCCC CGCGTTGCCA TCTCGCTATG
CCGCAATGCT CAGAGACGCC AAAGATGCTC GAGGTTGCCG AAAGGCACAC CGTTGCCTGT
CATGCAGTGG CTGCTTAA
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| Protein sequence | MALLSVEHLT KHFSLGRDLG AVLRRQPSNW IKPVEDVSFS IGEGEILGIV GESGCGKSTT
CNLISKLDDA TSGKILFDGE DVTHLSKTAL ARYRAQVQLI FQDPFDSLNP RLKVFDIVAE
APRALKLWDE VEIARRVPEM LALVGLPPER YAQRYPHQLS GGERQRVGIA SALVPEPRLV
IADEPVSMLD VSIRAGVMDL LRDLSTRLNF SCLYVSHDLS ILTHLCDRVM VMYLGQLVEV
ASSHDLVNSP RHPYTRALVA AVPVPDPAYR RKPVEIMGEL AKPVNPPPGC RFAPRCHLAM
PQCSETPKML EVAERHTVAC HAVAA
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