Gene Bpro_4397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4397 
Symbol 
ID4012929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4641176 
End bp4641538 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content57% 
IMG OID637944045 
Productendoribonuclease L-PSP 
Protein accessionYP_551182 
Protein GI91790230 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.455291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTA TCGAACGCAA GCACACCAAC GCACGCATGA GCAAGATCGT GCAGCATGGC 
GGCTTGGTCT ACCTATGCGG TCAGACCGCC ACTAGCAGCG CCAATGCCAA CGCTGACATC
ACCGCTCAGA TGCATGAAAC CTTGTCGCGT GTCGACGCGC TGTTAACCGA GGCGGGCAGT
AACCGCGAGC AGATCCTTTC AGCGACCATC TATTTGAAGA ACATAGACGA CTTCGCCGCG
ATGAATGCAG TCTGGGAATC GTGGATTGTC TCCCGCACCG CACCGGCGAG AACTACGGTA
GAGGCGCGAC TCGCAGCGGC AAACCTCTTG GTTGAGGTGA CCGTCATTGC CTCGTTGGGT
TGA
 
Protein sequence
MSTIERKHTN ARMSKIVQHG GLVYLCGQTA TSSANANADI TAQMHETLSR VDALLTEAGS 
NREQILSATI YLKNIDDFAA MNAVWESWIV SRTAPARTTV EARLAAANLL VEVTVIASLG