| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4380 |
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| Symbol | |
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| ID | 4012951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4621821 |
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| End bp | 4622864 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637944030 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_551167 |
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| Protein GI | 91790215 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.786087 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAA AATTCCTGAG AGCATCGCTT GCCACGGCCG TCGCCCTGGC TTGTGCGGGC
ATCGTCCACG CGCAATCCGT CCCTACCCTC TACGTCGGCG CCTACGGCGG CTCCACCGAA
AAGGCGTTCA AGGAAAAAAT CATCCCGGCC TTTGAGGCGG CCCGCAAGGT CAAGATCGTC
TATGTCGCGG GCAACTCCAC CGACACCCTG GCCAAGCTGC AGGCGCAGAA AGACAAGCAG
GAGCTTGACC TCGTGCTGTT GGATGACGGC CCAATGCAGC AGGCCGTGCA GTTCGGTTTC
TGCGACAAGG TCAAGGATGC GCCTATCTAC AAGGATATCT ACCCCTTGGC CCGCATCGAC
GACCGCTCCA TGGCTATCGG CGCCGTCGCC ACGGGCCTGG CCTACAACAC CGAAGCCTTC
AAGAAGGCCG GCTTGCCCAA GCCCGATTCA TGGCAAATCC TCACGGACAA GAAGTTCAAG
CAGAAGCTGG CCATCCCGCC GATCTCCAAC ACCTACGGCC TGCAGACGCT GATCATGTAC
GCCAGGATGC GCGGCGGCGG CGAAAAGGCC ATCGACGCCG GCTTCGACGC CATGGCCAAG
GAAGTCGCGC CCAACGTGCT GGCCTGGGAG CCATCGCCTG GCAAGATGAC CGAGCTTTTC
CAGAACGGCG ACATCAACCT CGCGGTGTGG GGCAGCGGGC GCACCGAGTC CTTCAGGGCC
ACCGGTTTCC CCATCGAATT CGTCTATCCC AAGGAAGGCG CGATGGCGCT GCTGATCGCG
GCCTGCCCGG TTGTCAACAG CGACGTGCCC GAGCAGGCCC AGGCCCTGCT GCAATACCTG
ATGACGCCTG AAGTGCAGGT CCTGCTGGCC GAGACCCAGG GCTTTGGTCC TGTCAACAGC
AAGGTCAAGC TTGACCCCGC CATCGCCGCC AAGGTCCCTT ACGGCCCGGC GCAGATCGGC
AAGCTGCTGC CGACTAACTG GTCCGTCGTC AACGAGAAGC GCGGCGAGTG GACGAATCGC
TGGAACCGCA CGATTGAACG TTAA
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| Protein sequence | MKAKFLRASL ATAVALACAG IVHAQSVPTL YVGAYGGSTE KAFKEKIIPA FEAARKVKIV
YVAGNSTDTL AKLQAQKDKQ ELDLVLLDDG PMQQAVQFGF CDKVKDAPIY KDIYPLARID
DRSMAIGAVA TGLAYNTEAF KKAGLPKPDS WQILTDKKFK QKLAIPPISN TYGLQTLIMY
ARMRGGGEKA IDAGFDAMAK EVAPNVLAWE PSPGKMTELF QNGDINLAVW GSGRTESFRA
TGFPIEFVYP KEGAMALLIA ACPVVNSDVP EQAQALLQYL MTPEVQVLLA ETQGFGPVNS
KVKLDPAIAA KVPYGPAQIG KLLPTNWSVV NEKRGEWTNR WNRTIER
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