Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4379 |
Symbol | |
ID | 4012950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4620661 |
End bp | 4621728 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637944029 |
Product | ABC transporter related |
Protein accession | YP_551166 |
Protein GI | 91790214 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.803501 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTCC TCTCCCTCCA AAAGCTCACC CGGCACTTCG ACGATTTCGT CGCGGTCGAA TCGCTGGACC TGGACATCGA GCGGGGCGAG TTCATCTCGC TGCTCGGCCC GTCCGGTTGC GGCAAGACGA CCACCCTGCA GATGATTGCG GGCTTCGTGA ATCCGACGCG CGGCAGCATC GTGCTCGAAG GCCAGGACAT CACCGCCCTG CGTCCCGAGA AGCGCGGCAT GGGTGTGGTG TTCCAGAGCT ATGCGCTGTT TCCCCACATG ACGGTCGAAG CCAACGTCGG CTTCGGCCTG GAGATGCGCG GCATGGGCCG CAGCGAGCGC GCCCAGCGCA TCGGCGAGAC GCTGGACCTG GTGCGCCTGG GTGGCCTGGG CAAGCGCTTC ACGCGTGAGC TCTCCGGCGG CCAGCGCCAG CGCGTGGCCA TCGCCCGTGC CCTGGCCATC CGCCCGCAAC TGCTGCTGCT CGACGAGCCC ATGTCCAACC TCGACGCCAA GCTGCGCGAA GACATGCACA TCGAACTGCG CGCCATCCAG CGCCACCTGG GCATCACCAC CTTGCTGGTC ACGCACGACC AGGTCGAAGC CATGACTATG AGCGACCGCA TCGCCGTCAT GCACGGCGGC AAGATCGTGC AGCTGGCCAT GCCTTTCGAA GCCTACGAGC AGCCCGGCTC GCCCTTCGCC TCGGCCTTCC TGGGCAAGAC GAATTCGCTG CGCGGTCGCG TCGTCACCAA CAACCAGCGC TGCGCCATCG TCAATGTGAA TGAGCGCCAG CTGCACATCC CGCACGGCGG CCGCAGCCTC GATGGAGACG TGCACGTCTT CGTGCGGCCT GAAAAGCTCC GCCTGGGCGC GGCCAGTGTC GGGTTTCCCG GCCAGGTCAA GACGCGCGTC TTCCTCGGCA ACCATTGGAT GCTGCAGGTC GACACCGCCA TGGGCCTGAT GAGTGTCAGC CTGCCCAACA TCGGCGAAGT GCCGCCGGCC GAAGGCAGCA CCGTCGGCGT GAGCTGGTCG GACGACGACC TGCGCGTGCT GCCCCTGCAG GAGGTGGCTC ATGGCTGA
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Protein sequence | MTFLSLQKLT RHFDDFVAVE SLDLDIERGE FISLLGPSGC GKTTTLQMIA GFVNPTRGSI VLEGQDITAL RPEKRGMGVV FQSYALFPHM TVEANVGFGL EMRGMGRSER AQRIGETLDL VRLGGLGKRF TRELSGGQRQ RVAIARALAI RPQLLLLDEP MSNLDAKLRE DMHIELRAIQ RHLGITTLLV THDQVEAMTM SDRIAVMHGG KIVQLAMPFE AYEQPGSPFA SAFLGKTNSL RGRVVTNNQR CAIVNVNERQ LHIPHGGRSL DGDVHVFVRP EKLRLGAASV GFPGQVKTRV FLGNHWMLQV DTAMGLMSVS LPNIGEVPPA EGSTVGVSWS DDDLRVLPLQ EVAHG
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