Gene Bpro_4379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4379 
Symbol 
ID4012950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4620661 
End bp4621728 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content67% 
IMG OID637944029 
ProductABC transporter related 
Protein accessionYP_551166 
Protein GI91790214 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.803501 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTCC TCTCCCTCCA AAAGCTCACC CGGCACTTCG ACGATTTCGT CGCGGTCGAA 
TCGCTGGACC TGGACATCGA GCGGGGCGAG TTCATCTCGC TGCTCGGCCC GTCCGGTTGC
GGCAAGACGA CCACCCTGCA GATGATTGCG GGCTTCGTGA ATCCGACGCG CGGCAGCATC
GTGCTCGAAG GCCAGGACAT CACCGCCCTG CGTCCCGAGA AGCGCGGCAT GGGTGTGGTG
TTCCAGAGCT ATGCGCTGTT TCCCCACATG ACGGTCGAAG CCAACGTCGG CTTCGGCCTG
GAGATGCGCG GCATGGGCCG CAGCGAGCGC GCCCAGCGCA TCGGCGAGAC GCTGGACCTG
GTGCGCCTGG GTGGCCTGGG CAAGCGCTTC ACGCGTGAGC TCTCCGGCGG CCAGCGCCAG
CGCGTGGCCA TCGCCCGTGC CCTGGCCATC CGCCCGCAAC TGCTGCTGCT CGACGAGCCC
ATGTCCAACC TCGACGCCAA GCTGCGCGAA GACATGCACA TCGAACTGCG CGCCATCCAG
CGCCACCTGG GCATCACCAC CTTGCTGGTC ACGCACGACC AGGTCGAAGC CATGACTATG
AGCGACCGCA TCGCCGTCAT GCACGGCGGC AAGATCGTGC AGCTGGCCAT GCCTTTCGAA
GCCTACGAGC AGCCCGGCTC GCCCTTCGCC TCGGCCTTCC TGGGCAAGAC GAATTCGCTG
CGCGGTCGCG TCGTCACCAA CAACCAGCGC TGCGCCATCG TCAATGTGAA TGAGCGCCAG
CTGCACATCC CGCACGGCGG CCGCAGCCTC GATGGAGACG TGCACGTCTT CGTGCGGCCT
GAAAAGCTCC GCCTGGGCGC GGCCAGTGTC GGGTTTCCCG GCCAGGTCAA GACGCGCGTC
TTCCTCGGCA ACCATTGGAT GCTGCAGGTC GACACCGCCA TGGGCCTGAT GAGTGTCAGC
CTGCCCAACA TCGGCGAAGT GCCGCCGGCC GAAGGCAGCA CCGTCGGCGT GAGCTGGTCG
GACGACGACC TGCGCGTGCT GCCCCTGCAG GAGGTGGCTC ATGGCTGA
 
Protein sequence
MTFLSLQKLT RHFDDFVAVE SLDLDIERGE FISLLGPSGC GKTTTLQMIA GFVNPTRGSI 
VLEGQDITAL RPEKRGMGVV FQSYALFPHM TVEANVGFGL EMRGMGRSER AQRIGETLDL
VRLGGLGKRF TRELSGGQRQ RVAIARALAI RPQLLLLDEP MSNLDAKLRE DMHIELRAIQ
RHLGITTLLV THDQVEAMTM SDRIAVMHGG KIVQLAMPFE AYEQPGSPFA SAFLGKTNSL
RGRVVTNNQR CAIVNVNERQ LHIPHGGRSL DGDVHVFVRP EKLRLGAASV GFPGQVKTRV
FLGNHWMLQV DTAMGLMSVS LPNIGEVPPA EGSTVGVSWS DDDLRVLPLQ EVAHG