| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4369 |
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| Symbol | |
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| ID | 4012940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4610728 |
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| End bp | 4612122 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637944019 |
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| Product | L-serine ammonia-lyase |
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| Protein accession | YP_551156 |
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| Protein GI | 91790204 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0215032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.503505 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGTCA GCGTTTTCGA TCTTTTCAAG ATAGGTATTG GCCCTTCGAG TTCACACACG
GTCGGACCGA TGCGTGCGGC GCGCATGTTC ACGCAGCGCT TGGTGAATGA GAACAAGTTG
GACACAACGG CGCTCGTGAG ATGCGAGCTC TACGGATCGC TCGGCGCGAC CGGCAAAGGC
CATGGCAGTG GAACCGCCGT ATTACTAGGG CTTTCTGGTT TTGAGCCAGA CACGATCGAT
CCGGATAAGA TTCCTTCAAT CCTAGAGCGT ATCCGCTCCA CCAATCAGAT CCTGCTGCTT
GGAGTTCACC CCATCACCTT CGATGAGAAA GTGGATGTTC TCTTCTTTCT TTCTAAGACG
CTTCCGTTTC ATGCAAATGG CATGACGTTC TCAGCGTTTC ACGCATCGGG CGAGCTCCTA
TGCTCGTATA CATACTACTC AGTGGGCGGC GGATTTGTCG TAAGCGAAGA AGTAGCCGGC
GACGGGTCTC GACACAAGAC CATCGCGCCG GATACCACCG TGCTTTCACA TCCTTTTCAC
AGTGGCGATG AGTTGCTGGC CATTGCGAAC ATAAACCATT GCAGCATCGC AGAGATCATG
CGACGGAACG AACGGTACTG GCGGACTGAC GCCGAGATTG ATCGCGGCCT ACTTAACATC
TGGTCCGTCA TGCAGGACTG CGTCACGCGT GGCTGCCGTG CTGAGGGCAC ACTGCCTGGA
CCCTTTAAGG TCCGTCGCCG TGCCGCCACT TTGCAACAGT CACTATTGGC AGCGCCAAAA
ACTGGTGCAA AGCCAGATCC GCTGAGCGCG ATAGACTGGA TTAACCTGTA TGCATTGGCT
GTCAACGAAG AGAATGCGTC TGGTGGGCGA GTCGTCACGG CACCGACGAA CGGTGCCGCG
GGCATCATCC CTGCCGTATT GCATTACTAC ACAGGCTTCG TGCATGGCGC CAACGATGCC
GGCGTGATTG AGTTTTTACT CACCGCCGGC GCTATTGGCC TTCTTTACAA GGAGAACGCC
TCCATCTCGG GAGCCGAGGT CGGTTGCCAG GGCGAGGTGG GGGTCGCATG CTCAATGGCA
GCGGCCGCGC TATGCGCCGT GATGGGCGGC ACGCCTGAGC AAGTCGAGAA CGCCGCCGAG
ATCGGCATGG AACATCATCT TGGGCTGACA TGCGATCCAG TGGGTGGACT GGTGCAGATT
CCTTGCATTG AGAGAAACGC CATCGCGTCT GTCAAAGCCG TCAATGCCGC GCGCATGGCA
CTGCATGGCG ACGGAGCACA TCACGTGAGC CTGGACAAAG TCATCAAGAC CATGCGCGAG
ACTGGTGCCG ACATGATGAC CAAGTACAAA GAGACTTCTC GCGGCGGTCT CGCAGTGAAC
ATTATTGAGT GCTGA
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| Protein sequence | MAVSVFDLFK IGIGPSSSHT VGPMRAARMF TQRLVNENKL DTTALVRCEL YGSLGATGKG
HGSGTAVLLG LSGFEPDTID PDKIPSILER IRSTNQILLL GVHPITFDEK VDVLFFLSKT
LPFHANGMTF SAFHASGELL CSYTYYSVGG GFVVSEEVAG DGSRHKTIAP DTTVLSHPFH
SGDELLAIAN INHCSIAEIM RRNERYWRTD AEIDRGLLNI WSVMQDCVTR GCRAEGTLPG
PFKVRRRAAT LQQSLLAAPK TGAKPDPLSA IDWINLYALA VNEENASGGR VVTAPTNGAA
GIIPAVLHYY TGFVHGANDA GVIEFLLTAG AIGLLYKENA SISGAEVGCQ GEVGVACSMA
AAALCAVMGG TPEQVENAAE IGMEHHLGLT CDPVGGLVQI PCIERNAIAS VKAVNAARMA
LHGDGAHHVS LDKVIKTMRE TGADMMTKYK ETSRGGLAVN IIEC
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