| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4368 |
|---|
| Symbol | |
|---|
| ID | 4012939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 4609701 |
|---|
| End bp | 4610603 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637944018 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_551155 |
|---|
| Protein GI | 91790203 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000508648 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.184507 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTG CACGCCTCAA AGCATTGCGA GAACTTTCAA TCCGCCAAAC GATGGCTGCG
GTTGCTGAGG CACTAAACCT CACCCCGTCG GCTGTTTCCC AACAGATCGC CCAGCTTGAA
GAGGAAGTCG GTGTTCCTCT AACCGAGCGC AGAGGCCGTG GGGTCAAGCT GACTTACGCG
GGCGAAGTCT TGGTATCGCA TGTGGAGCGC ATCATGGGCG TTCTAGATGA GGCCAGCTCG
GAGCTGGCCC TAATACGTAA AGAGATCGCC GGCACCTTGC GGATCGCCGC CTTTGCGACT
GCTGCAGCGG CACTGCTCCC TCCTGTGCTG CAAGCGCTTC GAAAAAGCTA TCCGCGTCTT
CAGATAACAA TTATTGAGAT GGAGCCGTCT GAGGGTTTGG CAGCCCTTGG TTCCTGGAAC
GTTGATTTGG CAATAGTGGA CGATCTTTCC GTCCGTTTGG CCCGTATGGA GAAGACGGTT
CACAAGGTGC GCCTTATTGA TGACGAGCTG AAAGTAGTGA TGGCAAAGAA CCATCATCTT
GCGGTCAAAG CATCCATTGT CCTATCTGAG CTAAAGGATG AGGAGTGGGC GATGGATTCC
GCAACTAGTT TCTATGGTGA ATTCGTAATG AATCTTTGCC GCCAAGCCGG CTTCACCCCT
CAGGTCAACG CCGCTTGCCG CGGCTCAGAA ATCATTGCCG CGATGGTGGC ATCCGGTTGC
TCTGTGTCCA TCATTCCCGG ACTACGCCTT GGGCAGATCT CGCAGCAGTT GGTTGCTCGC
CCCCTACGGC CGGCTGTGAC TCGTCGAATC TCAGTAGCTT TTCGCCAAGG GGAAAGGTCG
CATCCCGCCA TAAAGGTTTT CGTTGAACAG CTGCTGCGCA CTGCGCAAAC GATGACGCCT
TAA
|
|---|
| Protein sequence | MDIARLKALR ELSIRQTMAA VAEALNLTPS AVSQQIAQLE EEVGVPLTER RGRGVKLTYA
GEVLVSHVER IMGVLDEASS ELALIRKEIA GTLRIAAFAT AAAALLPPVL QALRKSYPRL
QITIIEMEPS EGLAALGSWN VDLAIVDDLS VRLARMEKTV HKVRLIDDEL KVVMAKNHHL
AVKASIVLSE LKDEEWAMDS ATSFYGEFVM NLCRQAGFTP QVNAACRGSE IIAAMVASGC
SVSIIPGLRL GQISQQLVAR PLRPAVTRRI SVAFRQGERS HPAIKVFVEQ LLRTAQTMTP
|
|---|
| |