| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4364 |
|---|
| Symbol | |
|---|
| ID | 4012974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 4605320 |
|---|
| End bp | 4606735 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637944014 |
|---|
| Product | amidase |
|---|
| Protein accession | YP_551151 |
|---|
| Protein GI | 91790199 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000480403 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.468217 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTTG CTTTCCTTTC CGCCACCGAT CTCGGACTAG CATTGGCCAA GGGCGAGCTC
ACGTCAGTGG CACTCGTGAC TGAGTTGCTC GCTCGCATCC GCACCTACGA CCCAATATTG
AACGCTTTCG TCGAGGTCTA TGGCGACGCT GCACTTCTGG CGGCACGGGA CTCGGACGGA
CGGCGGTCCC GCAACCAGGC AAGGGGCCCC CTTGACGGCG TTCCGTTCGC GGTCAAGGAT
CTGTTCGACG TCGAGGGCCA TGCCACGTTG GCCGGATCGA AGGCGTCCGC CCCTGCGGCC
GCTGCGCAAT CGGCCACCGC GGTCCGGCGA TTGCTAGCTG AGGGCATGGT CTTGCTCGGC
AAGACGCATA CGGTCGAGTT CGCGTACGGC AGCTGGGGAA CGAACCCTAG CTGCGGCACC
CCGGTCAACC CGCGCGATCC TATAGTTCAG CGCGTCCCGG GCGGATCGTC CAGCGGATCG
GGTGTGGCGG TGGCAGCCGG GCTGGTGCCC GTCGCGCTGG GCACCGATAC AGGCGGCTCG
GTGCGCAGCC CGTCGGCACT ATGCGGGATC GTCGGGATGA AGACGTCGCT CGGACTGATC
GGGCGCGGTG GGGTGCAGCC GCTCGCCCTT GTCTTCGACG CCGTGGGCCC AATGACTCGC
TCCGTCGAGG ACGTGGCGCT CATCCAGGCG GCGTTGCAAG GAGAGGATGC GGACGATCCG
GCGACGTTCG GGGTACCGCG GACGGATTCG CTCGTCGACC TAAACAAGGG TGTCGCAGGG
CTGACGCTGC GCTACCCGAC CATGGAGAAC CTAAAGGCTG CGGAACCCGA CATCCTTGAC
CGGTTCAAGG AGACGCTCGC TGATCTGAAA GCCATGGGCG CCGTCCTCGA CGAGACGCCG
CTACCTCGTC CCCTCGAAAC ATATGCGACC CTCACGGCCA ATATCACGAC GGTGGAGGCC
TGGAGCCGTT ACCGACATCT AATCGAGAAG GAGAACAGCC TCGTGGACCC GGAAATCGCG
ACGCGGATGT CGCGCGGCAG AACGATGAGT ATCACGGATT ACCTCGGCTA CCTGGAGCAG
CGGCGGCTGA TGCAAACGGA GTTTCACCGC TACTTTGCCG GGGCGAATGC CGTCCTGCTT
CCCTCGTCGC CCATCACAGC GAAGCCCATA GACGGAGTAC ACAATACCAA CGCTCCGTTT
GGCCTTTTCA CTCGTCTCGC CAATCTGATG GACCTCGCCT CCCTGAGCAT ACCGATGGGT
GACGCCGAGG GCCTCCCCAC CGCTGTTCAG ATCATGGTCC GTCGCTACGC CGACCCCCTG
GCTTTTCGAA TCGGACGCGC GCTTGAAATT CAGCGCGGCG GATTGTTCGT GCCCCCTCCC
GGCTACGAGC GCCTGGATCG CACGAAGATG CTTTGA
|
|---|
| Protein sequence | MDFAFLSATD LGLALAKGEL TSVALVTELL ARIRTYDPIL NAFVEVYGDA ALLAARDSDG
RRSRNQARGP LDGVPFAVKD LFDVEGHATL AGSKASAPAA AAQSATAVRR LLAEGMVLLG
KTHTVEFAYG SWGTNPSCGT PVNPRDPIVQ RVPGGSSSGS GVAVAAGLVP VALGTDTGGS
VRSPSALCGI VGMKTSLGLI GRGGVQPLAL VFDAVGPMTR SVEDVALIQA ALQGEDADDP
ATFGVPRTDS LVDLNKGVAG LTLRYPTMEN LKAAEPDILD RFKETLADLK AMGAVLDETP
LPRPLETYAT LTANITTVEA WSRYRHLIEK ENSLVDPEIA TRMSRGRTMS ITDYLGYLEQ
RRLMQTEFHR YFAGANAVLL PSSPITAKPI DGVHNTNAPF GLFTRLANLM DLASLSIPMG
DAEGLPTAVQ IMVRRYADPL AFRIGRALEI QRGGLFVPPP GYERLDRTKM L
|
|---|
| |