Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4363 |
Symbol | |
ID | 4012973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4604011 |
End bp | 4605060 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637944013 |
Product | LacI family transcription regulator |
Protein accession | YP_551150 |
Protein GI | 91790198 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000162438 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.697334 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACTT TATCGATCGA CGATACGACG GAACGGCCAA CCGGCAGACG ACCAAAGATG GCCGATATAG CGCGCATGGC AGGAGTCGAC ATCTCGACCG TCAGCCGCGC CTTGGCAGGA AGCCCGCGCG TCACCAAGGA GACCAGGGCG CTGATCGATC AGATTGTGCG CGACACCGGG TACGTGCTGA ACGAAGCAGC CCGCAATCTG CGGGATGGCC GCGCTAATCA GGTGCTTGTC ATCGTTTCGG ACATCGCTGC ACCGTTCTAT TCTGATGTTG TTCAGGGCAT CGTCGAGACG CTAGCGGAAC GTGGAATCAA TGTTTTGTTG GGCGTTACGC TGCGTCAGGC CAAGCGCGAG GCAAAACTGG GGAAGCAACT GCTGACCGGC GTGGTGGATG GCATCATCAC GGTCACCGGG AGTGTACCCA AGCCGATCCT CAACATGCAG GGCTTCGACC GCAAAGTCGT CGCGATATCG CGACCCGTAC CGCACGAGGG CGTCACGTGC GTGACAATCG ATAACTACGC TGCCGCCAAG GAAGTGATGG CACACCTCTA TGCGATGGGG CATCGGCGTA TTGTCCACAT CGGCGGACCG AATCACTCCG AGACATACCG TGACCGTAGT GCAGCGTACG TCGATTTCAT GCGCGATCAT GGCCTCGTCG AACTGACGAA CGTACGCTCA ACCGACTCTT TCAATGATGA TGCTGAGTCT GGTTTCGAGA TCATGAAATC CATGCTCAAC GATGGCTCAC GCCCCACGGC TGTCTTCTGT GCCACCGACG AGCTTGCGAT AAGCGCTATG GCAGCTGCTC GACAAGCCAA CCGAAACATA CCAGGTGACG TGTCGTTCTT TGGGTTTGAC GACCTGAAAT TGGCGGGGCT GATGCATCCC CCGCTGTCGA CAGTGTCCGT CCCACGCTTC GAGATGGGGA GAAGGGGAGC GGAAGAGCTT TTCCGCCAGA TCTACAAGGG TGAGATGCCA TCGACCAAAA TTGTGCTCGA GCATCGACTG GTACTGCGGG ACAGTGTGGC GAAGATCTGA
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Protein sequence | MPTLSIDDTT ERPTGRRPKM ADIARMAGVD ISTVSRALAG SPRVTKETRA LIDQIVRDTG YVLNEAARNL RDGRANQVLV IVSDIAAPFY SDVVQGIVET LAERGINVLL GVTLRQAKRE AKLGKQLLTG VVDGIITVTG SVPKPILNMQ GFDRKVVAIS RPVPHEGVTC VTIDNYAAAK EVMAHLYAMG HRRIVHIGGP NHSETYRDRS AAYVDFMRDH GLVELTNVRS TDSFNDDAES GFEIMKSMLN DGSRPTAVFC ATDELAISAM AAARQANRNI PGDVSFFGFD DLKLAGLMHP PLSTVSVPRF EMGRRGAEEL FRQIYKGEMP STKIVLEHRL VLRDSVAKI
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