| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4360 |
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| Symbol | |
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| ID | 4012970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4600085 |
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| End bp | 4601134 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637944010 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_551147 |
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| Protein GI | 91790195 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00124658 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.291499 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAAG CAAAACTGTA TTTGAGAATT TCAGCCGGCT TACTCGCTGC GGCCAGCGCA
GTCTTCTTCC ACCAGGCGGC ACCGGCGGCC GGTCCCGCCC AGGTCGTGGT CGCCTCTTAC
GGAGGCTCCT TCCAAGACGC CCAGACAAAG GCTTTTTTCG ATCCATACGC CAGAGCAACG
GGTGCCAAAG TCATCGGCAC GACCGGTACT GGGCATGCCA AGATCAAAGC CATGGTCACG
AGCGGCAACG TCACTTGGGA CGTGGTCTCG GCCGACGCCG CGGCCTTTGA GAACGAGGTG
AAGGATGATC TTCTTCAGCC GCTCGATTAT TCGGTGATCA AGGCCGATGG CATCCCGGCC
AGCTTCCGCA CAAAATACGG CATCGGCTAC ATGAAGTTCG CACAGAATCT GGCGTGGAAC
AAAGAAAAGT TTCCGCATGG ACTTACCCCG GCACAGTTCT TCGACCCAAC GGTGAAAGCG
CGTCGCGTGA TGTTGGCGGT GCCGTACTAC AACCTCGAAT TCGCGCTGCT GGCTGACGGT
GTGAAGCCGG CCGAACTTTA TCCGCTGGAC GTGGCCCGCG CCCTCAGAGT TATCGACCGG
GTCAAGCACC AGATTGTCGG CTTCAAGTCG CCCTCGGATG TCCAAGCGCT CATCCAGCAG
GGCGAGGTCG ACGTCGCCTT TGCCCCGGGC GGTCGCGTCC AAAATGCCAT AAAGGCCGGT
GCCAACTGGG CTTATGGGTG GAGCTCAGCG ATCACGGTGG TCGAATATTG GGCGGTGGTC
AAGGGTGCTC CGAATGCAGC AGAGGCGATG AAATTCATCA ATTTCGCCGT TCAGCCAAAG
CCGCAGGCGG AACTTCCTCG CCATATCTTT TATGGCCCGA CCAATGTCGA CGCGCTGAAG
CTTATTGACG GTGCAGCGCT CTCAGCCGTC GCCAAGGATC TGCCGGGCAA TCCGGCTAAC
GAGAAGTTCG GCGCAATTCT TAACTCGAAA TGGTGGAACG AGAACCTCGA GTCTGTGACG
GCCCGCTGGA ACACGTACGT CTTGCGCTAA
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| Protein sequence | MKQAKLYLRI SAGLLAAASA VFFHQAAPAA GPAQVVVASY GGSFQDAQTK AFFDPYARAT
GAKVIGTTGT GHAKIKAMVT SGNVTWDVVS ADAAAFENEV KDDLLQPLDY SVIKADGIPA
SFRTKYGIGY MKFAQNLAWN KEKFPHGLTP AQFFDPTVKA RRVMLAVPYY NLEFALLADG
VKPAELYPLD VARALRVIDR VKHQIVGFKS PSDVQALIQQ GEVDVAFAPG GRVQNAIKAG
ANWAYGWSSA ITVVEYWAVV KGAPNAAEAM KFINFAVQPK PQAELPRHIF YGPTNVDALK
LIDGAALSAV AKDLPGNPAN EKFGAILNSK WWNENLESVT ARWNTYVLR
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