Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4354 |
Symbol | |
ID | 4012964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4592642 |
End bp | 4593721 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637944004 |
Product | putative ABC transport system, substrate-binding exported protein |
Protein accession | YP_551141 |
Protein GI | 91790189 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.356253 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.710836 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTA GAGATCTTAT AAAAGCAGCC AGCTTTGCTG CAGTGGGCTC ATTTGGAGTG ACCCGCGCTT TTTCATTCGA AGGTCCCGAA CTCTACCCGG GTGAAAAAGT CTTGTACGAA GCTGCGGAAA AAGAAGGCTT GGTCGTCTCT TTTGACACGG GGCCGGAATG GGCAAATTGG AAATCACTGT TCCGCGAGTT CAAGAAGCGC TATCCAGAAG TCGAACTCAC CTATAACGAC CTGGGCTCTG CTGCAACTGT CGTTGCCCTG GAGAAGACGC GCCGCCGGCC TCAGGCAGAC ACTGCCTACT ATTTTGCCGC TTCAGCCGTT GATGCAGTGA AGAAGGATGT CGTCGCACCA TTTCAGCCGA TTAACTTTGA GAAGCTTCCG GCTGTGTTTC GAGAAGCGAG CGGCAAGTGG TTCACGATCC ACACGTTAAA TATTGCCTTC CTGGTGAATA AAAAACTCGT CAAAAACTCC CCTACCAGCT GGGCCGACCT GCTTAAACCG GAGTTTAAGA ACTCAGTTGT TTACCTTGAT CCCCGGACAA CAGGCGTGGG CCAAGTGATG GTGTTTGCCG CTGCATACGC GACTGGAGGA TCGGTGGATA ACGTGAAGCC GGGGATTGAT TATCTCGGGC AACTCCATGC GCTAGGTAAT GTGCAGCGCG TCGAGGGAAC CACCCCTTAT GCGAAGTTCC TCAAAGGTGA AATACCTGTG TGGATCAGCT ATGAAAACGA TGGCCTCAAA GCGAAACACG TGGATGGTAT GGGCGATGCC CTAGAAGTCA TCATTCCCAA GGAGGCGAGC GTTGCCGCGC CTTACGCCAT TAGTCTTGTC AAGAACGCCC CAAATCCGAA CAGCGGCAAG CTCTGGCTGA ATTTCATCAT GAGCGAAGTG GGGCAAGGAC TCTTCGCTCA AGGATTCGTT CGTCCTTCGG TCCCAGGTGT GCGGCTAAGC GCGGACATTC AAGCAAAAAT GCCGGCTGCA CCGCAGCTGC GCCCGCTTGA TGTTGTAAAG GCGTCCGAGC GCAAGGCGGA GATTGACCGC CTTTGGGCAC AAGCTGTTCT TACCAAGTAA
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Protein sequence | MKRRDLIKAA SFAAVGSFGV TRAFSFEGPE LYPGEKVLYE AAEKEGLVVS FDTGPEWANW KSLFREFKKR YPEVELTYND LGSAATVVAL EKTRRRPQAD TAYYFAASAV DAVKKDVVAP FQPINFEKLP AVFREASGKW FTIHTLNIAF LVNKKLVKNS PTSWADLLKP EFKNSVVYLD PRTTGVGQVM VFAAAYATGG SVDNVKPGID YLGQLHALGN VQRVEGTTPY AKFLKGEIPV WISYENDGLK AKHVDGMGDA LEVIIPKEAS VAAPYAISLV KNAPNPNSGK LWLNFIMSEV GQGLFAQGFV RPSVPGVRLS ADIQAKMPAA PQLRPLDVVK ASERKAEIDR LWAQAVLTK
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