Gene Bpro_4349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4349 
Symbol 
ID4012959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4587179 
End bp4589260 
Gene Length2082 bp 
Protein Length693 aa 
Translation table11 
GC content54% 
IMG OID637943999 
Producttransketolase 
Protein accessionYP_551136 
Protein GI91790184 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0021] Transketolase 
TIGRFAM ID[TIGR00232] transketolase, bacterial and yeast 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.331421 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCTT CATCCCTCTC TCTTATGGCC AATGCAATAC GGGCGCTCGC TATCGACGCC 
GTGGAGCGCG CCAACTCGGG CCATCCAGGC GCACCCATGG GCATGGCTGA CATGGCGGCT
GCCTTATGGA CTCGTCATCT AAAGCACAAC CCGAGCAATC CAAACTGGTT CAATCGCGAC
CGATTTGTGT TATCCAACGG CCATGCGTCA GCGCTCCTTT ATGCTGTTCT GCATCTGACT
GGCTACGAAC TTTCTATCGA AGATATAAAG AACTTCCGGC AGATCCACAG CAAAACTCCG
GGTCATCCAG AGCTCGGCAT TACCCCAGGC ATCGAAACCA CAACCGGGCC GCTAGGGCAA
GGTCTTGGTA ATGCGGTCGG TATGGCATTG TCCGAGAAGC TATTGGCAAA TGAATTTAAT
CGACCGGGAT ACACCGTTAT CGATCACAAC ACGTACGTCT TTCTTGGCGA CGGTTGCTTG
ATGGAAGGCA TTAGTCACGA AGTGGCAGCT TTAGCCGGCG CGTGGAAGCT CAACAAACTA
GTCGCGCTAT ACGACGATAA CGGAATCTCG ATTGATGGCA AGGTAGAACC ATGGTTTCCT
GAAGACACAG CTGCGCGGTT CGCTGCATAC GGGTGGAATG TTCTTGGCCC CATCGACGGC
CACGATGGTG AACTCGTGGC GGAAACTATC CGGTGTGCAC GGCGGTCGAA CACCCAACCG
ACATTAATTA TCTGCAAGAC GCAAATCGGA AAATACTCGC CCAACCGAGC CAATACACCA
AAAGTTCATG GCGAACCATT GGGCGCCGAA GAAATACAGT TGACCCGTGA CGCTATGGAA
TGGACAGATA AACCGTTCCA CATCCCAGCC GATGTCTATG CAGCATGGAA TGCTAGAGAT
AAAGGCCATA CGGCGGAATC CCTTTGGGAC GCGCAATTCG CCTCCTATGA AGCCATATAT
CCTGATTTAG GTGCTGAGCT GTACCGGCGG ATGCGCGGAG ATCTGCCGAA CGCTTTTGGG
AAACTGGCCC ATGAGGCCAT CGAAAAATCT TGCAACCGGG CCGATAGCGT CGCTTCCCGC
AGAGCGTCCC AATTGGCATT GGAAGAATTT ACTGCAAAGT TACCTGAGAT GCTGGGAGGT
TCAGCGGATC TCACCAGTTC AAATCTTACA AACACCAAGT CTACGAGTAG CTTGCGCTTC
AAAACAGATG GACAGGTTGA AGCTTGCTCC AACGGCAAAG GGGTGGAAGT ACCTGGCCGA
CATATTAACT ATGGCGTCCG TGAGTTCGGC ATGGCATCTA TCATGAATGG GATTGCGCTG
CATGGCGGGC ACATACCTTA CGGCGGGACT TTTTTAACGT TCAGTGATTA CAGTCGCAAC
GCTTTGCGAA TGGCCGCGCT CATGAAGCTG CGAGTCATTC ACGTGTTCAC TCACGACTCG
ATAGGCCTCG GTGAGGATGG ACCCACCCAC CAACCGGTAG AACATGCCGC AAGCCTGCGC
TTAATCCCAA ACCTTGACGT GTGGCGCCCC GCAGACACTG TCGAGGCGAC AGTTGCGTGG
GCGGTGGCGC TTCAGAATAA ATCTCAGCCT ACGGCGTTGC TTCTTAGTCG GCAGTCCCTC
AAATTTCAGC CCAAAACTGA GACAGATGAC GTTTGCAAAG GTGGCTACGT CCTTAAAGAC
CCACCAGAGA CTGGAGTCGG CAGGCCCTTG GAGGCAGTAC TGATTGCTAC TGGTTCAGAA
GTCCAGCTTG CCTTACGCGC GCAAGTATTG CTAGCAGACG CCGGGATTTT GACCAGGGTC
GTCTCCATGC CGAGCACGAC GACATTTGAT AAACAAAGCT CGCACTATAA GTCCCTGGTG
TTACCCAGCA GGTTGCCGCG AATTGCGGTT GAAATGGGTG TTTCGCACGG CTGGTGGAAA
TACGGTTGTT CTGCTGTAGT CGCAATAGAT ACCTACGGGG AGTCGGCTCC CGCCGAAGTG
CTATTCAATC ACTTCGGATT TACGCCTCAG GGTGTCGCGA GTGTTGTGCG CGAGGTCATT
TCTAAGCCGC AGCTGTCTCA GCTGGCGCCG TTGACATCAT GA
 
Protein sequence
MTASSLSLMA NAIRALAIDA VERANSGHPG APMGMADMAA ALWTRHLKHN PSNPNWFNRD 
RFVLSNGHAS ALLYAVLHLT GYELSIEDIK NFRQIHSKTP GHPELGITPG IETTTGPLGQ
GLGNAVGMAL SEKLLANEFN RPGYTVIDHN TYVFLGDGCL MEGISHEVAA LAGAWKLNKL
VALYDDNGIS IDGKVEPWFP EDTAARFAAY GWNVLGPIDG HDGELVAETI RCARRSNTQP
TLIICKTQIG KYSPNRANTP KVHGEPLGAE EIQLTRDAME WTDKPFHIPA DVYAAWNARD
KGHTAESLWD AQFASYEAIY PDLGAELYRR MRGDLPNAFG KLAHEAIEKS CNRADSVASR
RASQLALEEF TAKLPEMLGG SADLTSSNLT NTKSTSSLRF KTDGQVEACS NGKGVEVPGR
HINYGVREFG MASIMNGIAL HGGHIPYGGT FLTFSDYSRN ALRMAALMKL RVIHVFTHDS
IGLGEDGPTH QPVEHAASLR LIPNLDVWRP ADTVEATVAW AVALQNKSQP TALLLSRQSL
KFQPKTETDD VCKGGYVLKD PPETGVGRPL EAVLIATGSE VQLALRAQVL LADAGILTRV
VSMPSTTTFD KQSSHYKSLV LPSRLPRIAV EMGVSHGWWK YGCSAVVAID TYGESAPAEV
LFNHFGFTPQ GVASVVREVI SKPQLSQLAP LTS