Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4349 |
Symbol | |
ID | 4012959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4587179 |
End bp | 4589260 |
Gene Length | 2082 bp |
Protein Length | 693 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637943999 |
Product | transketolase |
Protein accession | YP_551136 |
Protein GI | 91790184 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0021] Transketolase |
TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.331421 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCTT CATCCCTCTC TCTTATGGCC AATGCAATAC GGGCGCTCGC TATCGACGCC GTGGAGCGCG CCAACTCGGG CCATCCAGGC GCACCCATGG GCATGGCTGA CATGGCGGCT GCCTTATGGA CTCGTCATCT AAAGCACAAC CCGAGCAATC CAAACTGGTT CAATCGCGAC CGATTTGTGT TATCCAACGG CCATGCGTCA GCGCTCCTTT ATGCTGTTCT GCATCTGACT GGCTACGAAC TTTCTATCGA AGATATAAAG AACTTCCGGC AGATCCACAG CAAAACTCCG GGTCATCCAG AGCTCGGCAT TACCCCAGGC ATCGAAACCA CAACCGGGCC GCTAGGGCAA GGTCTTGGTA ATGCGGTCGG TATGGCATTG TCCGAGAAGC TATTGGCAAA TGAATTTAAT CGACCGGGAT ACACCGTTAT CGATCACAAC ACGTACGTCT TTCTTGGCGA CGGTTGCTTG ATGGAAGGCA TTAGTCACGA AGTGGCAGCT TTAGCCGGCG CGTGGAAGCT CAACAAACTA GTCGCGCTAT ACGACGATAA CGGAATCTCG ATTGATGGCA AGGTAGAACC ATGGTTTCCT GAAGACACAG CTGCGCGGTT CGCTGCATAC GGGTGGAATG TTCTTGGCCC CATCGACGGC CACGATGGTG AACTCGTGGC GGAAACTATC CGGTGTGCAC GGCGGTCGAA CACCCAACCG ACATTAATTA TCTGCAAGAC GCAAATCGGA AAATACTCGC CCAACCGAGC CAATACACCA AAAGTTCATG GCGAACCATT GGGCGCCGAA GAAATACAGT TGACCCGTGA CGCTATGGAA TGGACAGATA AACCGTTCCA CATCCCAGCC GATGTCTATG CAGCATGGAA TGCTAGAGAT AAAGGCCATA CGGCGGAATC CCTTTGGGAC GCGCAATTCG CCTCCTATGA AGCCATATAT CCTGATTTAG GTGCTGAGCT GTACCGGCGG ATGCGCGGAG ATCTGCCGAA CGCTTTTGGG AAACTGGCCC ATGAGGCCAT CGAAAAATCT TGCAACCGGG CCGATAGCGT CGCTTCCCGC AGAGCGTCCC AATTGGCATT GGAAGAATTT ACTGCAAAGT TACCTGAGAT GCTGGGAGGT TCAGCGGATC TCACCAGTTC AAATCTTACA AACACCAAGT CTACGAGTAG CTTGCGCTTC AAAACAGATG GACAGGTTGA AGCTTGCTCC AACGGCAAAG GGGTGGAAGT ACCTGGCCGA CATATTAACT ATGGCGTCCG TGAGTTCGGC ATGGCATCTA TCATGAATGG GATTGCGCTG CATGGCGGGC ACATACCTTA CGGCGGGACT TTTTTAACGT TCAGTGATTA CAGTCGCAAC GCTTTGCGAA TGGCCGCGCT CATGAAGCTG CGAGTCATTC ACGTGTTCAC TCACGACTCG ATAGGCCTCG GTGAGGATGG ACCCACCCAC CAACCGGTAG AACATGCCGC AAGCCTGCGC TTAATCCCAA ACCTTGACGT GTGGCGCCCC GCAGACACTG TCGAGGCGAC AGTTGCGTGG GCGGTGGCGC TTCAGAATAA ATCTCAGCCT ACGGCGTTGC TTCTTAGTCG GCAGTCCCTC AAATTTCAGC CCAAAACTGA GACAGATGAC GTTTGCAAAG GTGGCTACGT CCTTAAAGAC CCACCAGAGA CTGGAGTCGG CAGGCCCTTG GAGGCAGTAC TGATTGCTAC TGGTTCAGAA GTCCAGCTTG CCTTACGCGC GCAAGTATTG CTAGCAGACG CCGGGATTTT GACCAGGGTC GTCTCCATGC CGAGCACGAC GACATTTGAT AAACAAAGCT CGCACTATAA GTCCCTGGTG TTACCCAGCA GGTTGCCGCG AATTGCGGTT GAAATGGGTG TTTCGCACGG CTGGTGGAAA TACGGTTGTT CTGCTGTAGT CGCAATAGAT ACCTACGGGG AGTCGGCTCC CGCCGAAGTG CTATTCAATC ACTTCGGATT TACGCCTCAG GGTGTCGCGA GTGTTGTGCG CGAGGTCATT TCTAAGCCGC AGCTGTCTCA GCTGGCGCCG TTGACATCAT GA
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Protein sequence | MTASSLSLMA NAIRALAIDA VERANSGHPG APMGMADMAA ALWTRHLKHN PSNPNWFNRD RFVLSNGHAS ALLYAVLHLT GYELSIEDIK NFRQIHSKTP GHPELGITPG IETTTGPLGQ GLGNAVGMAL SEKLLANEFN RPGYTVIDHN TYVFLGDGCL MEGISHEVAA LAGAWKLNKL VALYDDNGIS IDGKVEPWFP EDTAARFAAY GWNVLGPIDG HDGELVAETI RCARRSNTQP TLIICKTQIG KYSPNRANTP KVHGEPLGAE EIQLTRDAME WTDKPFHIPA DVYAAWNARD KGHTAESLWD AQFASYEAIY PDLGAELYRR MRGDLPNAFG KLAHEAIEKS CNRADSVASR RASQLALEEF TAKLPEMLGG SADLTSSNLT NTKSTSSLRF KTDGQVEACS NGKGVEVPGR HINYGVREFG MASIMNGIAL HGGHIPYGGT FLTFSDYSRN ALRMAALMKL RVIHVFTHDS IGLGEDGPTH QPVEHAASLR LIPNLDVWRP ADTVEATVAW AVALQNKSQP TALLLSRQSL KFQPKTETDD VCKGGYVLKD PPETGVGRPL EAVLIATGSE VQLALRAQVL LADAGILTRV VSMPSTTTFD KQSSHYKSLV LPSRLPRIAV EMGVSHGWWK YGCSAVVAID TYGESAPAEV LFNHFGFTPQ GVASVVREVI SKPQLSQLAP LTS
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