Gene Bpro_4345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_4345 
Symbol 
ID4012994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4583587 
End bp4584717 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content64% 
IMG OID637943995 
ProductFAD dependent oxidoreductase 
Protein accessionYP_551132 
Protein GI91790180 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.957412 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGA AGGCTATCAA CACCCTTGTT GTCGGCGGTG GCTTGCACGG ACTGTCGGCC 
GCGCTGCATC TGGCCCGTGC TGGCCGCCGC GTCGTGATTC TAGAACGGTC GTGGGTTGGC
CGCCATGCCT CCGGCGCGAC AGCGGCCGGG GTCCGCACAC TCAACCGCCA TCCGGCCGAG
ATTCCGATCT CGCTGGAATC CATGGACATG TGGCACAACA TCGAGTCTAT CGTTGCCGGT
GATTGTGGCT TTCATGCTCA TGGTCAGATC AACGTTGCTG AATACCCGGA TCATCTGCCT
GCCCTGGAGA CGCGTTTCGC GATGATGCGG GACGCTGGGT ACCGGCATGA GGAACTGGTC
GATCGGGCAG AGTTGCTGAG GCTCGTTCCT GCGATCTCGC CCCACTGCAT GGCTGCGCTG
ATTGCCCGAC GTGACGGCGC AGCTGATCCG CATCGGACCT TGCAGGCGTT CCGCCGCAGC
GCGGAGGCCG CGGGCGTTAC GATCCACGAA GGTCTCGGCG TCACGGCGAT CGAGCGGGCA
GGCTCCGACT GGCGAGTCCG TACCGACGCT CGGGATTTCG TGGTGCCGAC CGTCGTCAAT
GCCGCCGGGG CCTGGGCGGG AAAGATCGCG GCCATGTTGG GCGACGAAAT CCCACTCGGC
CATAAGGCCT CGATGATGGT CGTGACGGAG CGCATTGCGC CGCTCCTCAG GCCGGTCGTC
AGCGTCGTCG GGCGGCCGCT CTCCCTGAAG CAGTCCGACC AGGGAACCCT GGTAATCGGG
GGAGGGCTTC AGGGCAGCGC TGACATCGAA GCGCAGAAAA GTTTCGTCAA TTTCACCGAA
CTCGCCAAAG GCGCGCGGGC GGCGACCGAT CTCTTTCCCT CCATCGGGCC AGTGCGAATC
GTGCGTGCCT GGACGGGCAT GGAGGCGAAA ACAGATGACT ATCTGCCCGT GATCGGCGCC
TCGCCGAACG CGAGCGGCGC CTATCACGCT TTCGGGTTCT CCGGCCACGG TTTCCAGCTC
GTTCCGGTGG TTGGCGCCAT CTTGGCCGAC CTCATCGTCC GCGGTGGCAC CAACAGACTG
ATAGAGGGTT TCTCTGCGGA TCGGCTCATG CAACAGCGAG CCGCCGCATG A
 
Protein sequence
MSTKAINTLV VGGGLHGLSA ALHLARAGRR VVILERSWVG RHASGATAAG VRTLNRHPAE 
IPISLESMDM WHNIESIVAG DCGFHAHGQI NVAEYPDHLP ALETRFAMMR DAGYRHEELV
DRAELLRLVP AISPHCMAAL IARRDGAADP HRTLQAFRRS AEAAGVTIHE GLGVTAIERA
GSDWRVRTDA RDFVVPTVVN AAGAWAGKIA AMLGDEIPLG HKASMMVVTE RIAPLLRPVV
SVVGRPLSLK QSDQGTLVIG GGLQGSADIE AQKSFVNFTE LAKGARAATD LFPSIGPVRI
VRAWTGMEAK TDDYLPVIGA SPNASGAYHA FGFSGHGFQL VPVVGAILAD LIVRGGTNRL
IEGFSADRLM QQRAAA