| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4344 |
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| Symbol | |
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| ID | 4012993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4581047 |
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| End bp | 4582627 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637943994 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_551131 |
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| Protein GI | 91790179 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.133353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTC CTGTTCTCAC CATTAAGACG ACCGCGTTTG CCGCCCTCTT GGCGTTCAGT
GGCATCTGTC CGCCTGCGTT CGCCCAAGCT AAGGACCGCC CTGTGCTTAG CATCAGTTCG
GACGCAACAG ATATCTCAAC GCTCGACCCG CACCGCGCGA CAACTTCGGA CGACAAGGGC
GTCGCGTCGC AAGTGTTCAA CGGCCTGGTG CGCTTTCCAC CGGGCAGCGC CGATCCAAAA
GAGCTTCAGC CCGATCTCGC GGAAAAGTGG CAATCATCCC CCGACAAAAG GACTTGGACG
TTCTATCTGC GCAAGGGTGT GCAGTTCCAT GGTGGATATG GCGAGGTGAA GGCCGCTGAC
GTTGTGTATT CGTTCATGCG TGCAGCCGAC AAAGGTCGAT CCAGTTTTGC AGCGAACTTC
GAAGTCATCG AAAAAGTTGA GGCGCGGGAC GACTACACCG TGCGTTTCTT GCTGAAGTAT
CCGGACGCCG CGTTCCTCGG TCGCGTATCG AATTACCACG CTGGCAACAT CGTTAGTCAG
GCGGCGGCCG AAAAACTCGG GGACAGATTC GGTCAGTCAC CGATCGGCAC CGGTCCATTT
GCATTCAGCG AACACGTTAC GCAGCAATAT GTGAAGTTGG TCGCTAACGA CGCGTACTTC
CGTGGCGCGC CAAAACTGGC CGCCATTACC TATCGCATGA TTCCGTCGGA CAGCGCGCGT
GAACTGGCGT TTACGTCCAA AGAAGTCGAC ATGATGAGTG GTAAGCGGGA GCAACGCTGG
GTGGACGGCG CGAGCAAACG CGGCATGAAG GTCGATGTCT TTGACCCTGC CGAGTTCCGT
ACGCTTCACA TCAATCGCAC CATTAAGCCC TTGGATAATC TGAAGGTGCG CCAGGCAATC
GCTGCGGCGG TCAACGTGGA CGAAATCCTG AGGTATGTCG GCAAAAGTGT GGGCGACAAA
GGCTGCTCGA TCATCCCCAA CGGCTATCTA GGCGAGGATT GCAGCGCGGG GGGCTACACC
TATGACGTTG CGCGCGCCAA GAAATTGTTG ACCGAAGCCG GTTTTCCTAA CGGAATTTCT
ATCAAGTCGG TGGTGTCGAA CGTCTCTGCG CAGCAACCCA TCATGCAAAT TGTCCAGTCA
CAGCTGGCCA AAGCCGGCAT CAAGCTGGAA ATGGAGGTCG TGGACCATGC GACCTATCAA
GCCAAAAGCC GGAAAGACCA AAGCGCATTG GTGTTCTATG GCGCGGCTCG TTTTCCTATC
GCAGATGTCT GGCTCACGGA GTTCTACGAC TCGGCCGCCT CCATTGGGGC GCCTAAGGCA
ATTTCCAACT TCTCGCATTG CTCCGTGGGT GACGACGCCA TCCGGCAGGC GCGCATTGAG
CCTGATGCGC AGAAGCAGCT GGCATTGTGG AAACAAGCGC AGCAAAAGAT CCATGCGGAT
GTCTGCTCCG TGCCGCTCTT TGGCCTGAAG CAAGTGTGGG TGCATAGCGA CCGCGTGAAC
TACGGCTATA CGCTGAAAGG CGCCCTGAAC CTACAGCCGC CCATCACCGA ACTGGCGACC
GTTACGCGGA GCGCACCTTG A
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| Protein sequence | MKLPVLTIKT TAFAALLAFS GICPPAFAQA KDRPVLSISS DATDISTLDP HRATTSDDKG
VASQVFNGLV RFPPGSADPK ELQPDLAEKW QSSPDKRTWT FYLRKGVQFH GGYGEVKAAD
VVYSFMRAAD KGRSSFAANF EVIEKVEARD DYTVRFLLKY PDAAFLGRVS NYHAGNIVSQ
AAAEKLGDRF GQSPIGTGPF AFSEHVTQQY VKLVANDAYF RGAPKLAAIT YRMIPSDSAR
ELAFTSKEVD MMSGKREQRW VDGASKRGMK VDVFDPAEFR TLHINRTIKP LDNLKVRQAI
AAAVNVDEIL RYVGKSVGDK GCSIIPNGYL GEDCSAGGYT YDVARAKKLL TEAGFPNGIS
IKSVVSNVSA QQPIMQIVQS QLAKAGIKLE MEVVDHATYQ AKSRKDQSAL VFYGAARFPI
ADVWLTEFYD SAASIGAPKA ISNFSHCSVG DDAIRQARIE PDAQKQLALW KQAQQKIHAD
VCSVPLFGLK QVWVHSDRVN YGYTLKGALN LQPPITELAT VTRSAP
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