| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4338 |
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| Symbol | |
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| ID | 4012987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4575305 |
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| End bp | 4576309 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637943988 |
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| Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like |
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| Protein accession | YP_551125 |
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| Protein GI | 91790173 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.301077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCCT CTCCTGTTTC CCAACCTCCG GTCCTGGAGC TTCGTGACCT GCGCACGGAG
TTTCGCGTGG GCGGCGCATG GCATGCCGCA GTACGCGAAG TGTCGCTGCA AGTATCGGCT
AATGAGACGC TTGCCGTGGT CGGCGAGTCA GGCAGCGGCA AGAGTGTGAC GGCGCTGTCG
GTGCTGCGAC TTTTGCCCGA GTCCGCTGCA CGCCATGGTG GCGGGCAGAT TCTGTTGGAC
GGCGTTGATC TGACCATGTT GTCCGAGAAG CAGATGACAA AGCTGCGCGG TGAAGCGATT
GCCATGATCT TTCAGGAGCC AATGACCTCA CTGAATCCCA CTATGACTGT GGGCGACCAA
ATTTCCGAAG CTATCCAGCA GCATCGCCAC CTGTCCAGGA AAGAGGCACG CCGGCTTGCA
TTAGAGGTGC TGGAAGAAGT GAAGATCCCC GCTGCCGCCA AGCGCTTTGA CGACTATCCA
CACCAGTTCT CCGGTGGAAT GCGCCAGCGT GTGATGATCG CGATGGCGTT GGCTTGCAAG
CCCCGCGTTC TGCTGGCCGA CGAGCCGACC ACCGCGCTCG ATGTGACTAT TCAGGCGCAG
ATCCTCAGCC TCTTGTCCGA ATTGAAGACC GCACACGGCA TGGGCGTGGT GTTCATCACC
CACAACCTGG GAGTTGTGGC GCAGATCGCC GACCGGGTGG CCGTGATGTA TGCCGGCGAA
GTTGTAGAGA CTGCCGACGT TCAGACCTTG TTCGCCCGGC CCATGCATCC CTACACGGAA
GCGCTCTTGC GCGCCATGCC AAGGGTGGAC GCGAGCGCAG TGCTTGAATC CATTCCAGGC
GGTGTGCCAG CCATCAACGC ACTACCCAAA GGTTGCGCAT TTGCACCGCG CTGTCGCCTA
AAAGAAGCGC GCTGCGAGGC CGAACGGCCA AATTTGATGC GCATTGGTAC TTCGCACCAA
GTACGCTGCG TGGTTCGCGT TGAACAATAT GGAGACATGG CATGA
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| Protein sequence | MNPSPVSQPP VLELRDLRTE FRVGGAWHAA VREVSLQVSA NETLAVVGES GSGKSVTALS
VLRLLPESAA RHGGGQILLD GVDLTMLSEK QMTKLRGEAI AMIFQEPMTS LNPTMTVGDQ
ISEAIQQHRH LSRKEARRLA LEVLEEVKIP AAAKRFDDYP HQFSGGMRQR VMIAMALACK
PRVLLADEPT TALDVTIQAQ ILSLLSELKT AHGMGVVFIT HNLGVVAQIA DRVAVMYAGE
VVETADVQTL FARPMHPYTE ALLRAMPRVD ASAVLESIPG GVPAINALPK GCAFAPRCRL
KEARCEAERP NLMRIGTSHQ VRCVVRVEQY GDMA
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