| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4335 |
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| Symbol | |
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| ID | 4012984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 4572241 |
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| End bp | 4573821 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637943985 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_551122 |
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| Protein GI | 91790170 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.83307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCGG TCGACTATGT GATCGCGTGT CGAGCGCTCC TCATCGCCGC ATGTATTGGC
CTTGTCGGGC CGGTATTTGC TCAGGAGTCC ATCCTCCGCA TCGGAAGTGA TGCGATTGAC
ATCACTACTC TGGATCCGCA CCGCACGGCG GTGTCGGAAG AAAAGGGCTT GATTAGCATG
ATCTTCGGTG GCTTGGTGAG ATTTCCACCC GGTTCCGCTG ACCCCGAGAA AATAGAAGGT
GATTTGGCCG AGAGCTGGCA GGCTTCTGCT GATGGACTGA CCTGGACATT CAAGCTGCGT
CACGGTGTGC AGTTCCACCG CAACTATGGC GAGGTGAATG CGGAGGATGT GGTTTATAGC
CTAATGCGCG CAGCCGATCC AAAGCGGTCC TCGTTTTCGT CTACCTTTGA GCCGGTGAAG
GAAGTGAGCG CGCTCGATTC GCATACGGTG CGCATACAGC TCAAGGCGCC AGTACCCAGT
CTGCTGGGAC TGGTTGCCAA CTACCACGGC GGAATGGTCG TAAGCCGCAA GGCCGACCAG
GATCTGAAAG ACGCGTTCAA ATTGAAGCCA GTTGGCTTTG GGCCCTTCGA GTTCGTTGAA
CATCAGAAAC AGCGCGAGGT GGTGCTGAAG GCGCACGACA AGTATTTCCG TGGGAAGCCG
AAGATAGAGC GCATCGTTTA CCGATTCATC CCCTCCGAGG CCGTCCGGGG GCTAGCGTTC
GCTACTGGCG AGCTTGACCT GGTCGCCGGC CAGCGCGATC AGCGCTGGGT GCAGCGGGCC
CGGCTCTGGG CGCCGCCTAA GGACCAATCG TCCGTCAAAG TCGATGTCTT CGGACCAGGT
GAATTTCGTA CCCTGATGCT CAATCGGCGC ATCAAGCCGC TGGACGACCC GCGTGTTCGG
GAAGCCGTAG CACGCGCCGT GGATGTGCAG GAACTAGTTC ACTTCGTCGG CGCGGATATC
GTCAAGCCTG GCAGATCTGT CATTCCGCCA GGCTACGCAG GTGAGGTAGA CGTTGGGCCA
AAGTTTCCTT ATAACGTCGG CAAGTCAAAA GCTTTGCTGA CGGAAGCCGG CTACGCCAAC
GGCATCACCC TAAGGGCGGT AGTGTCCAGT ACCGCCTCGC AACTGTCGGT TATGGATGTG
GTGCAGAAAC AGCTCAAGCG CGCGGGCATC AACTTAACCA TGGACGTGGT CGAGCACGCC
GCTTATCACG CGCAGATCCG CAAGGACGTG AGTGCAATCG TCTTCTACGG CGCTGCTCGA
TTCCCGGTGG CCGATTCCTA CCTCACAGAG TTCTATCACT CCCGCTCCGA GATCGGCGCA
CCTACTCAGG TTACCAATTT CTCCCACTGC AATGCAGCCG ACAAGGAAAT TGATGCGGCG
CGCGCAACCC CAAATGCGGC TGCGCGAAGC TCGCTTTGGC GCGTGGCACA GGTGAAGATC
AACGCAGATC TCTGCGCCAT CCCGCTATTT GATCTGCAGC AGGTCTGGGC CCGTCGCGGT
GCGCTCGACT ATGGAGTGCC TCTTGAGGGC GCAATGAACC TCTTTCCGCC GATCAACGAA
AAATCGACAC TGAAGAAATG A
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| Protein sequence | MKAVDYVIAC RALLIAACIG LVGPVFAQES ILRIGSDAID ITTLDPHRTA VSEEKGLISM
IFGGLVRFPP GSADPEKIEG DLAESWQASA DGLTWTFKLR HGVQFHRNYG EVNAEDVVYS
LMRAADPKRS SFSSTFEPVK EVSALDSHTV RIQLKAPVPS LLGLVANYHG GMVVSRKADQ
DLKDAFKLKP VGFGPFEFVE HQKQREVVLK AHDKYFRGKP KIERIVYRFI PSEAVRGLAF
ATGELDLVAG QRDQRWVQRA RLWAPPKDQS SVKVDVFGPG EFRTLMLNRR IKPLDDPRVR
EAVARAVDVQ ELVHFVGADI VKPGRSVIPP GYAGEVDVGP KFPYNVGKSK ALLTEAGYAN
GITLRAVVSS TASQLSVMDV VQKQLKRAGI NLTMDVVEHA AYHAQIRKDV SAIVFYGAAR
FPVADSYLTE FYHSRSEIGA PTQVTNFSHC NAADKEIDAA RATPNAAARS SLWRVAQVKI
NADLCAIPLF DLQQVWARRG ALDYGVPLEG AMNLFPPINE KSTLKK
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