| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4327 |
|---|
| Symbol | |
|---|
| ID | 4013014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 4562876 |
|---|
| End bp | 4564195 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637943978 |
|---|
| Product | AAA ATPase, central region |
|---|
| Protein accession | YP_551115 |
|---|
| Protein GI | 91790163 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACG ATGACATGGA TGAGAAGCCG TCAGGCTTCG AGAAGATACG AAGAACCGTT
CGCGGTGAAA GCCTTGACAG CCAAAGTTGC AGCATTGAGA TTTTTCTTCC CCAGCACCTG
GTGGATCATT TCAATGACGA GGCAAGAATG CTGGATGAGG CAAAACGTAA AGTAGCCAGG
GAAGGCCGGG AAAGGCAGGC CTCCCGGTAT GAAATGGCCG ATCGCGCGAG CGAAGAGAAA
GCGGCGGCCG CGCCGGCCTT GGCTGCGGCG CCGGTTCCGG CAAAAACCGC TCCCCCTGAA
TCGCTTGTGC CCGGCATCGA TTTCGACCCC CAGCTCAAAC ATCTGGTCTA CGCCACAACG
GAGCCCGAGG CGGTGGTTCT CCGGACCAAG CTGATGGCCG ATGAGGAGAT CAGGGTGCGA
GACCTGGAGA TCGTGGATCG ACTGAAGGCC AAGGGGCCCT TGCGCAGGAT CATCAATCCC
TTCCAGTGCG ATCCCAGCCT GGCGCCTTTC GACAGGCTGG CGGGCCGGCA TCCCCATTTT
GGGCCGGTGA TTGATTTCGT CAAAATCCAG GTCGTCCGAT GCCGGGCGAA TGCAAAACCC
CTGCGGATAC CCCCTATCCT GCTGTTCGGC GGACCGGGGC TGGGCAAGTC ACATTTCACA
CGCGACCTGG CGGCCGCCCT GGGCACCGTC TGCCGCCGCT GCGCCTGGGA TGGCGCGGTC
TCCAATGCCA CCCTACTGGG CTCGGACAGA AAGTGGTCGA ACTCGGCCAT AGGCGTTTTG
TTCGATCTCC TGTGTCTGGG CGACTGCGCC AACCCGGTGG TGCTGCTCGA TGAGCTGGAC
AAGGTGGGTC GGGACACCAA AGACGATCCC CTGGCGCCCT TACACAGCCT GCTGGAACCC
AGCACGGCCA CGCAGGTTCG CGATGCCTCC CTGGATTTCG TCTTCGACGC CAGTCTGGTG
ACCTGGATTG GCACCGCGAA CAGCGTGATG CTCATCCCCT CCTCGCTGCG GTCGCGGTTT
AGGGAGTTTC ACATCGGCCA CCCCACGGCC GAGCAGGCCC TCACACTGGC GTTCTCGGTG
GCGGCTAACG CGATTGAGAA AACGGCATCC CCGGACTTTG CACCGCCCAA ACGGGAGGTG
GTACTGCGGA TTGCCCACCT GACCCCCAGG GAAATCTACC AGGTCGTCGA GGAGGCGGTG
GGAAGAGCCG CGCTCAATGT GCGTACATGG CTCGAGGTGA ATGATCTGCC TGCGGAGCTG
ATCCCGCTTG ATGGGGACTC ACGGCTGGAA TGTGAAGGTG GCGTGAGGTA TTTGCATTAA
|
|---|
| Protein sequence | MSDDDMDEKP SGFEKIRRTV RGESLDSQSC SIEIFLPQHL VDHFNDEARM LDEAKRKVAR
EGRERQASRY EMADRASEEK AAAAPALAAA PVPAKTAPPE SLVPGIDFDP QLKHLVYATT
EPEAVVLRTK LMADEEIRVR DLEIVDRLKA KGPLRRIINP FQCDPSLAPF DRLAGRHPHF
GPVIDFVKIQ VVRCRANAKP LRIPPILLFG GPGLGKSHFT RDLAAALGTV CRRCAWDGAV
SNATLLGSDR KWSNSAIGVL FDLLCLGDCA NPVVLLDELD KVGRDTKDDP LAPLHSLLEP
STATQVRDAS LDFVFDASLV TWIGTANSVM LIPSSLRSRF REFHIGHPTA EQALTLAFSV
AANAIEKTAS PDFAPPKREV VLRIAHLTPR EIYQVVEEAV GRAALNVRTW LEVNDLPAEL
IPLDGDSRLE CEGGVRYLH
|
|---|
| |