| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4290 |
|---|
| Symbol | |
|---|
| ID | 4013053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 4526439 |
|---|
| End bp | 4527365 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637943942 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_551080 |
|---|
| Protein GI | 91790128 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.82906 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGGC TTCAATCAAT GCGCGTGTTT CAACAGGTGG TGGACGACGG CAGCTTTGCC
GCTGCCGCCC GTAAATTCGA CCTGTCGTCG GCCGTGGTGA CCCGGCTGGT CAGCGACCTG
GAAGACCATC TGGGCGTGCG GCTGCTGCAT CGCACCACCC GGCGCATGGC ACTGACGGAT
GCAGGTGTTG CCTACCTGGC TCGCGTGCGC CACATCCTGA GCGACATCGA CGAGGCCCAC
GCGGCGGCGC AGGCGCATGC CCAGGAGATG TCCGGCGTGA TCCGCATCCT GACGCCGCCC
ATCTTCGGTG TGCATGTGCT GGGGCCGCTG GTGGCCGAGT TCGGGCGACG CTATCCCAAG
GTCGTGCTCG ATATTTACGT CGACTCGCCG CTCGTGCCGC CGGTGGAAGA CTACGACCTG
ACGCTGCTGG GCGCGACCGA TACCTTTGAC GCCAACATCA TTGCGCGGCC GATTGCCTCG
TCGGACGGCA TCCTGTGCGC CTCACCCGAC TACCTGCGCC GCAATGGCAT TCCGCAGCAG
CCCGAAGACC TCGCCCGGCA CCGCTGCCTG CGGATCAAGG CACCGGCGAA CCGGCACCGC
GTCTGGCGCC TCATCAATCC CGACGAGAAT AGGCGCGAAC TGGAAGTGCC GATCGAGCCC
GCCATGCTGG TCAACCATTC CGACACGCTG ATACGCGCCG GTGTCGACGG AGCCGGCATC
ATCAGCCAGT CGATCGACCT GGTGGCCAAC CACCTCCACA GCGGCGCGCT GAAACGAATC
CTGTCGCCCT GGATCACGGG CACCAACACC CTGTACGCGG CGCTGCCCAG CCGCAAATTC
ATTCCGGCAA GAACCAGCGT GTTTCTGGAA TTCATGACCG AGTACACGCG AACTGTGATC
AAGAAAATGG ACGCGCGGCA CGACTGA
|
|---|
| Protein sequence | MDRLQSMRVF QQVVDDGSFA AAARKFDLSS AVVTRLVSDL EDHLGVRLLH RTTRRMALTD
AGVAYLARVR HILSDIDEAH AAAQAHAQEM SGVIRILTPP IFGVHVLGPL VAEFGRRYPK
VVLDIYVDSP LVPPVEDYDL TLLGATDTFD ANIIARPIAS SDGILCASPD YLRRNGIPQQ
PEDLARHRCL RIKAPANRHR VWRLINPDEN RRELEVPIEP AMLVNHSDTL IRAGVDGAGI
ISQSIDLVAN HLHSGALKRI LSPWITGTNT LYAALPSRKF IPARTSVFLE FMTEYTRTVI
KKMDARHD
|
|---|
| |