Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4285 |
Symbol | |
ID | 4013048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4519407 |
End bp | 4520345 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637943937 |
Product | LysR family transcriptional regulator |
Protein accession | YP_551075 |
Protein GI | 91790123 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.203182 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAGTGA AGCGCGCCGT GCTGGGGCAG TTGAGCGACA TGGACCTGCG GCTGCTGCAG GTGTTCAAGA GCGTGGTGGA TTGCGGTGGC ATGGCCGCGG CTGAGCTGGA GCTCAACATC GGCACGTCCA CGGTGAGCCG CCATGTGAAG GACCTGGAGA CCCGGCTGGG CCTGGTGCTG TGCCGCCGTG GCCGGGCCGG TTTTGCCCTC ACGCCCGAGG GGCAACGGGT CTACGAAGAG ACTTTGCGCT TGCTGGCTTC GGTGGAGGGT TTCCGCAACA GCATCGACGA TATCCACTCA CGCATGGGGG GAGCGCTGGC GGTCGCAGTG TTCGACAAGA CCGCCAGCAA TCCGCGGGCC CACATTGGTG AGGCGATTGC CGAATTCACC GAACAGGCGC CCGACGTGCA CCTGCAACTG CATGTGGCTT CAATCAACGC CATCGAGCGT GGCGTGATGG ATGGCAGCTA CCAGGTGGGC ATCATTCCGG CCCACCGCAC TTCTCACAGT CTGCTGTATG CCGAGCTGTT CAGCGAGACC ATGCTGCTGT ACTGCGGCGC GCAGCATCCG CTGTTTGGCG CCGACCCGGG GTCTTCGCTG ACCTGGGACG GGCTGCAGGC CTATCATTTC GCGGGGCTGG GCTATCACTC GCCCAACATG GCCTTAAGCC ACAGCGCCGG CCTGTCGCGC AAGGCCACGG GGTTTGACCA GGAGGCCATT GCCACCCTGA TTCTCTCGGG GAAATTTCTC GGCTTCCTGC CAGACCATTA CGCCGAGGGG TTTGAGCGAC GCGGCCAGAT GCGGGCGGTG CAGCCCGCCG TGTTCCGCTA CCCCTGCACT TTTGTGAGCC TGCTCAGGCG TTCCCCCCAG CCGTCGCGCG TGGTACAGGC CTTTCACGAT TGCCTGGTGC GGGCGCACGG CAAGATCGGG GCGCCCTGA
|
Protein sequence | MQVKRAVLGQ LSDMDLRLLQ VFKSVVDCGG MAAAELELNI GTSTVSRHVK DLETRLGLVL CRRGRAGFAL TPEGQRVYEE TLRLLASVEG FRNSIDDIHS RMGGALAVAV FDKTASNPRA HIGEAIAEFT EQAPDVHLQL HVASINAIER GVMDGSYQVG IIPAHRTSHS LLYAELFSET MLLYCGAQHP LFGADPGSSL TWDGLQAYHF AGLGYHSPNM ALSHSAGLSR KATGFDQEAI ATLILSGKFL GFLPDHYAEG FERRGQMRAV QPAVFRYPCT FVSLLRRSPQ PSRVVQAFHD CLVRAHGKIG AP
|
| |