| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4281 |
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| Symbol | |
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| ID | 4013044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 4514211 |
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| End bp | 4516361 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637943933 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_551071 |
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| Protein GI | 91790119 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.344477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.133481 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCCC CCGCCCCTGT TTCCCCCATC TCCACTGCTG CGCCGTCTGG CGCTTTTCCC
GCCAGTACCG GGCTCAACCT CGCGCAGCAG GAAGCCGTCA ACTACCTGCA CGGCCCCTGC
CTGGTGCTGG CCGGTGCCGG CTCGGGCAAG ACGCGGGTGA TCACGCACAA GATCGGCCGG
CTGATCCAGT CCGGGCTGAA GGCCGAGCAG ATTGCCGCCA TCACCTTCAC CAACAAGGCG
GCCGCCGAGA TGCGCGAACG CGCCAAAAGC CTGATCGGCA AGCAAGCCAA GGGCGTGCTG
ATCTGCACCT TTCACGCACT GGGCGTGCGC ATGCTGCGGC AGGACGGCCA GGCGCTGGGC
CTGAAGCAGC AGTTCTCTAT CCTGGACAGC GATGACGTGA CCAGCATTTT GAAAGACGCC
GGCGGCAGCA CCGACGTGGC AACGGCGCGC CAGTGGCAGT GGACCATCAG CGCCTGGAAA
GGCCAGGGCC TCAATGCCGC CCAAGCCGCA GCCCAGGCCA GCAACGACGA AGAGCGCCTG
GTGGCGCGCG TCATGGCGCA CTATGAAGAG CGCCTGACGG CCTACCAGAG CGTGGACTTT
GACGACCTGA TCGGCCTGCC GCTCAAGCTG CTGCGGGAGC ACGAAGCGGT CCGCAACAAA
TGGCAGCAGT CGCTGGGCCA TGTGCTGGTC GACGAATACC AGGACACCAA CGCCACGCAA
TATGAGGTGC TCAAACTGCT GGTGGGCACG CGCGGCCGCT TCACGGCGGT GGGCGATGAC
GACCAGTCGA TCTACGGCTG GCGCGGCGCC ACGCTGGACA ACCTGAAGAA ACTGCCGGAG
GACTACCCCA ACCTCAAGGT GGTGAAGCTG GAGCAGAACT ACCGCTCGAC CAGCGCCATC
CTGCGCGCCG CCAACAACGT GATCGGCCCC AATCCCAAGC TGTTTCCAAA GACCCTGTTC
TCGGAACTCG GCGAGGGCGA GCCGGTGCGC GTGGTGGACT GTGACAGCGA AGAGCACGAG
GCCGAGCGCG TGGTGGCCCG CATCCAGAGC CTGCGCGCGG GCGGCGAGCT GCAGGCGGTG
GGCAGCCAGT ACAAGGAATG GAAAGATTTT TGCGTGCTCT ACCGCGCCAA TCACCAGGCC
AAGCCGCTGG AAAAAGCCTT TCGCAAGGCG CAGATCCCGT ACAAGGTGTC GGGCGGGCAA
AGCTTTTTCG ACCGCGCCGA GATCAAGGAC CTGTGCAGCT GGATGGTCCT GCTGGTCAAC
AACGATAACA ACCCGGCCTT CATGCGCTCG GTGACCACGC CCAAGCGCGG CATCGGCCAC
ACCACGCTGG GCACCTTGGG CACCTTTGCC GACCAGTACA AGCTCAGCCT GTTTGAAGCG
CTGTTCAGCA ACTCATTGAG CTCGGTGCTG CCGGCCAAGG CGGTCGGTTC GCTGCAGGAA
TTCGGCCGCT ACCTGAACGA GCTGGAATAC CGTGCCAGGC GCACCGTGGG CGCGGAAGAT
GCGCGCACGT TTCTGAACGA CTGGCTCAAG GAAATCGACT ACGAAAAACA CCTCTACGAC
GGCGAAGACA GTGAAAAAGT CGCGGCCGCG CGCTGGAGCA ATGTGATGGA TTTTTGCGAC
TGGATGGCGC TGCGCTGCGG CGGCCAGATC GACGACACCT CGGGCGCCGT GGTTGAAAGC
GAAAAGAAAA CCATGCTCGA AGTGGTGCAG ACGATTGCGC TGCTGTCCAC CATCAGCGAG
CGCGAGGGTG ACCAGAATGT GGTGACACTG TCCACCCTGC ACGCCTCCAA GGGCCTGGAG
TGGCCGCATG TGATGCTGGC CGGCTGCAAC GAAGGCCTGC TGCCCTTCAA GCTCGAAGAA
GACGACGGCA GCAACACCGA CAACATTGCG TTGCGCCTGC AGGAAGAGCG CCGCCTGATG
TATGTGGGCA TCACCCGCGC CCAGCGCACG CTGGCGGTCA ACTGGCTGCG CCGGCGCAAG
AAGAACCGTG ACACCATCGC CGGCATCCCG AGCCGGTTTA TTGCCGAGAT GGCGCTGGAC
AAGGCCACGG TGAAAGAAGA CCCGCGCGAA AAGCTCAAGG CCCTGCGGGC CGAGTTTGCC
AAAAAATCAG CCGATGGACT GGCCGCCGCG GCGGCCTCGG AACTACGTTA G
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| Protein sequence | MSSPAPVSPI STAAPSGAFP ASTGLNLAQQ EAVNYLHGPC LVLAGAGSGK TRVITHKIGR
LIQSGLKAEQ IAAITFTNKA AAEMRERAKS LIGKQAKGVL ICTFHALGVR MLRQDGQALG
LKQQFSILDS DDVTSILKDA GGSTDVATAR QWQWTISAWK GQGLNAAQAA AQASNDEERL
VARVMAHYEE RLTAYQSVDF DDLIGLPLKL LREHEAVRNK WQQSLGHVLV DEYQDTNATQ
YEVLKLLVGT RGRFTAVGDD DQSIYGWRGA TLDNLKKLPE DYPNLKVVKL EQNYRSTSAI
LRAANNVIGP NPKLFPKTLF SELGEGEPVR VVDCDSEEHE AERVVARIQS LRAGGELQAV
GSQYKEWKDF CVLYRANHQA KPLEKAFRKA QIPYKVSGGQ SFFDRAEIKD LCSWMVLLVN
NDNNPAFMRS VTTPKRGIGH TTLGTLGTFA DQYKLSLFEA LFSNSLSSVL PAKAVGSLQE
FGRYLNELEY RARRTVGAED ARTFLNDWLK EIDYEKHLYD GEDSEKVAAA RWSNVMDFCD
WMALRCGGQI DDTSGAVVES EKKTMLEVVQ TIALLSTISE REGDQNVVTL STLHASKGLE
WPHVMLAGCN EGLLPFKLEE DDGSNTDNIA LRLQEERRLM YVGITRAQRT LAVNWLRRRK
KNRDTIAGIP SRFIAEMALD KATVKEDPRE KLKALRAEFA KKSADGLAAA AASELR
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